ID I1PH13_ORYGL Unreviewed; 659 AA.
AC I1PH13;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 24-JAN-2024, entry version 53.
DE RecName: Full=PUM-HD domain-containing protein {ECO:0000259|PROSITE:PS50303};
OS Oryza glaberrima (African rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=4538 {ECO:0000313|EnsemblPlants:ORGLA03G0365900.1, ECO:0000313|Proteomes:UP000007306};
RN [1] {ECO:0000313|Proteomes:UP000007306}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IRGC 96717 {ECO:0000313|Proteomes:UP000007306};
RA Wing R.A., Yu Y., Rounsley S., Reddy-Marri P., Goicoechea J.L.,
RA Sisneros N., Lee S., Song X., Angelova A., Kudrna D.P., de Baynast K.,
RA Zuccolo A.;
RT "The complete genome of Oryza glaberrima.";
RL Submitted (JUN-2010) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EnsemblPlants:ORGLA03G0365900.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (JUN-2015) to UniProtKB.
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DR AlphaFoldDB; I1PH13; -.
DR STRING; 4538.I1PH13; -.
DR EnsemblPlants; ORGLA03G0365900.1; ORGLA03G0365900.1; ORGLA03G0365900.
DR Gramene; ORGLA03G0365900.1; ORGLA03G0365900.1; ORGLA03G0365900.
DR eggNOG; KOG2050; Eukaryota.
DR HOGENOM; CLU_016751_0_0_1; -.
DR OMA; QYMTIVI; -.
DR Proteomes; UP000007306; Chromosome 3.
DR GO; GO:0005730; C:nucleolus; IEA:EnsemblPlants.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR GO; GO:0009793; P:embryo development ending in seed dormancy; IEA:EnsemblPlants.
DR GO; GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
DR Gene3D; 1.25.10.10; Leucine-rich Repeat Variant; 2.
DR InterPro; IPR011989; ARM-like.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR012959; CPL_dom.
DR InterPro; IPR033133; PUM-HD.
DR InterPro; IPR040059; PUM3.
DR InterPro; IPR001313; Pumilio_RNA-bd_rpt.
DR PANTHER; PTHR13389:SF0; PUMILIO HOMOLOG 3; 1.
DR PANTHER; PTHR13389; UNCHARACTERIZED; 1.
DR Pfam; PF08144; CPL; 1.
DR SMART; SM00025; Pumilio; 5.
DR SUPFAM; SSF48371; ARM repeat; 1.
DR PROSITE; PS50303; PUM_HD; 1.
PE 4: Predicted;
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884};
KW Translation regulation {ECO:0000256|ARBA:ARBA00022845}.
FT DOMAIN 87..476
FT /note="PUM-HD"
FT /evidence="ECO:0000259|PROSITE:PS50303"
FT REGION 1..79
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 21..37
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 54..79
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 659 AA; 73564 MW; 53878B8D95EA9CE6 CRC64;
MAGGGDLQSP KKRKRDAARK PKTLAKGGDD GKKWKRPSDA NMAQGGGGGE VKVKKEPVTA
KEKRLAAKEM AESRKKKRKR NYSLEKELTV LWEKMRCHNV SSTERSKLVS EALRKMDGKY
SEIAGSHVTA RVLQTCVKLC SQSERDAIFE ALQPDLLTLS LKKYAVFLVK KLIKRATKKQ
FEWFISSLHG RVAKLLRHTI GASVVDFAYQ LAMPPQKRRL LLELYSTELQ LFTDLAGQKT
HSLLETISNL GLQKSSVLQH MTTMIYPILE KGIVEYPIVH TAVLEYFTIA DKTSATDVIR
QFIPLLTQGS SAIDGDEPSV APELQKKLKA KKKRLTEPLL VRIMNTREGL KIGVSCLKHG
SAKDRKKIIK SLKGHIMKLA LSDYGCILLV AILSIVDDTK LVTKIVIQEL AKHLKQLIFD
KNGRRPLLQL LHPNCSRYLP PADLACLNYR VPSLISKDEA SESAAEDIPE NKVDVATNKE
QDGSEGMQSA SDSKKDPFQR RHELLIKSEL AEVLIQTLIE NVGELLRTNF GKDVLHEVAV
GGEDNILEGI TDRIYSLHNA IASDAARPKT EDTEHAFDNY HSSRLIRRLI LESPAFAAIL
WKKALEGKCK TWADGHSSKV VAAFLESPDS KVRDLAKAEL QPLVDRGILK IPDYKAVEK
//
