ID I1PQ24_ORYGL Unreviewed; 376 AA.
AC I1PQ24;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 24-JAN-2024, entry version 38.
DE RecName: Full=RRM domain-containing protein {ECO:0000259|PROSITE:PS50102};
OS Oryza glaberrima (African rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=4538 {ECO:0000313|EnsemblPlants:ORGLA04G0229300.1, ECO:0000313|Proteomes:UP000007306};
RN [1] {ECO:0000313|Proteomes:UP000007306}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IRGC 96717 {ECO:0000313|Proteomes:UP000007306};
RA Wing R.A., Yu Y., Rounsley S., Reddy-Marri P., Goicoechea J.L.,
RA Sisneros N., Lee S., Song X., Angelova A., Kudrna D.P., de Baynast K.,
RA Zuccolo A.;
RT "The complete genome of Oryza glaberrima.";
RL Submitted (JUN-2010) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EnsemblPlants:ORGLA04G0229300.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (JUN-2015) to UniProtKB.
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DR AlphaFoldDB; I1PQ24; -.
DR STRING; 4538.I1PQ24; -.
DR EnsemblPlants; ORGLA04G0229300.1; ORGLA04G0229300.1; ORGLA04G0229300.
DR Gramene; ORGLA04G0229300.1; ORGLA04G0229300.1; ORGLA04G0229300.
DR eggNOG; ENOG502S19D; Eukaryota.
DR HOGENOM; CLU_060647_2_1_1; -.
DR OMA; YMLKCKE; -.
DR Proteomes; UP000007306; Unassembled WGS sequence.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR Gene3D; 3.30.70.330; -; 1.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR PANTHER; PTHR32343:SF28; OS04G0624800 PROTEIN; 1.
DR PANTHER; PTHR32343; SERINE/ARGININE-RICH SPLICING FACTOR; 1.
DR Pfam; PF00076; RRM_1; 1.
DR SMART; SM00360; RRM; 1.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR PROSITE; PS50102; RRM; 1.
PE 4: Predicted;
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00176}.
FT DOMAIN 3..77
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT REGION 222..376
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 230..250
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 258..285
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 301..315
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 351..368
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 376 AA; 40813 MW; 7507CC0A53589EEF CRC64;
MVSTIKVHNV SLEASEQDIR EFFSFSGVIV HVEMQSGDER SQFAYITFED DEGAERAMLL
TGATVVDMSV IITPATNYQL PAAVLADIES KNAGGVESAL RKAEDAVVSM LAKGFVLGKD
ALERAKSFDE KHQLTSTATA KVTSLDRKMG LSQKFSTGTL VVNEKMKEMD QKYQVAEKTK
SALAAAEQTV STAGSAIMSN RYILTGAAWV TDAYSKVATT ATDAGAKSKE MVVAEQDDKH
QDDKPAKDYS PISSKEFVQE GKHQEGERPK KNMPEKPEMG KRELENQEAA IPTAHAQENA
QITGKEHKHQ EADLPKADIP GSFTMAAKSE KHRNPYSELS KTHIPGSPAT IPVCTATTDV
NSTKTPKKPE NAEGFI
//