ID I1Q5G1_ORYGL Unreviewed; 624 AA.
AC I1Q5G1;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 27-MAR-2024, entry version 53.
DE RecName: Full=RING-type E3 ubiquitin transferase {ECO:0000256|ARBA:ARBA00012483};
DE EC=2.3.2.27 {ECO:0000256|ARBA:ARBA00012483};
OS Oryza glaberrima (African rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=4538 {ECO:0000313|EnsemblPlants:ORGLA06G0237400.1, ECO:0000313|Proteomes:UP000007306};
RN [1] {ECO:0000313|Proteomes:UP000007306}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IRGC 96717 {ECO:0000313|Proteomes:UP000007306};
RA Wing R.A., Yu Y., Rounsley S., Reddy-Marri P., Goicoechea J.L.,
RA Sisneros N., Lee S., Song X., Angelova A., Kudrna D.P., de Baynast K.,
RA Zuccolo A.;
RT "The complete genome of Oryza glaberrima.";
RL Submitted (JUN-2010) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EnsemblPlants:ORGLA06G0237400.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (JUN-2015) to UniProtKB.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine +
CC [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-
CC cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.;
CC EC=2.3.2.27; Evidence={ECO:0000256|ARBA:ARBA00000900};
CC -!- PATHWAY: Protein modification; protein ubiquitination.
CC {ECO:0000256|ARBA:ARBA00004906}.
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DR AlphaFoldDB; I1Q5G1; -.
DR EnsemblPlants; ORGLA06G0237400.1; ORGLA06G0237400.1; ORGLA06G0237400.
DR Gramene; ORGLA06G0237400.1; ORGLA06G0237400.1; ORGLA06G0237400.
DR eggNOG; KOG0167; Eukaryota.
DR HOGENOM; CLU_006348_5_1_1; -.
DR OMA; AQFGDYR; -.
DR UniPathway; UPA00143; -.
DR Proteomes; UP000007306; Unassembled WGS sequence.
DR GO; GO:0004842; F:ubiquitin-protein transferase activity; IEA:InterPro.
DR GO; GO:0007166; P:cell surface receptor signaling pathway; IEA:InterPro.
DR GO; GO:0016567; P:protein ubiquitination; IEA:UniProtKB-UniPathway.
DR CDD; cd16664; RING-Ubox_PUB; 1.
DR Gene3D; 1.20.930.20; Adaptor protein Cbl, N-terminal domain; 1.
DR Gene3D; 1.25.10.10; Leucine-rich Repeat Variant; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR036537; Adaptor_Cbl_N_dom_sf.
DR InterPro; IPR011989; ARM-like.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR000225; Armadillo.
DR InterPro; IPR045210; RING-Ubox_PUB.
DR InterPro; IPR003613; Ubox_domain.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR23315:SF328; RING-TYPE E3 UBIQUITIN TRANSFERASE; 1.
DR PANTHER; PTHR23315; U BOX DOMAIN-CONTAINING; 1.
DR Pfam; PF00514; Arm; 1.
DR Pfam; PF04564; U-box; 1.
DR SMART; SM00185; ARM; 4.
DR SMART; SM00504; Ubox; 1.
DR SUPFAM; SSF48371; ARM repeat; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS50176; ARM_REPEAT; 3.
DR PROSITE; PS51698; U_BOX; 1.
PE 4: Predicted;
FT DOMAIN 262..329
FT /note="U-box"
FT /evidence="ECO:0000259|PROSITE:PS51698"
FT REPEAT 345..387
FT /note="ARM"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00259"
FT REPEAT 387..429
FT /note="ARM"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00259"
FT REPEAT 469..511
FT /note="ARM"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00259"
SQ SEQUENCE 624 AA; 69049 MW; 51EBFEC54AD14533 CRC64;
MLRMGAAVAE AEPSGRQLSD GDLLEELLST ANAARAFHEF RQSQRKECFN LLRWLQLLLP
LVQELRESAP ALSDDAYRRL ALLGRAFQAA RRLLRCCHDG SKIYLTLESE AVMGRFRGVY
EKMNMALEGM PYAELGVSDE VKEQVELISA QLKKRSKKRT ETQDMELAMD LMMILQSKEQ
DANNADRPIL DRLAKRLQLQ SLADLRAETM AIKKLINDHQ SDSTNQIVDL LHRLKAIAGV
DEKNILGDVF IPKYLEKCPS LMIPNDFLCP ISLEIMTDPT YERRSIQKWL DAGQRTCPKT
QQPLGHLSLA PNYALKNLIM QWCDKNKVEI HSGDPPPEPP EDPKVVIPTL VKDLSSPNLD
VQRKAVKKIR TLSKENPENR LLVTDNAGIP ALIGLLPYPD KKMQENTVTS LLNLSIDEAN
KLLIARGGAI PLIIDVLRNG SVEGQENSAA ALFSLSMVDE NKVAIGTLGG IPPLVDLLQN
GTVRGKKDAS TAIFNLMLNN GNKLRAIEAG ILPTLLKLLD DKKAAMVDEA LSIFLLLASN
PTCRGEVGTE HFVEKLVQII KEGTPKNKEC AVSVLLELGS SNNALMAHAL GFDLHDHLAD
IAKNGTSRAQ RKANSLIQLA RKCS
//