ID   I1Q8M9_ORYGL            Unreviewed;       559 AA.
AC   I1Q8M9;
DT   13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT   13-JUN-2012, sequence version 1.
DT   27-MAR-2024, entry version 45.
DE   RecName: Full=FAD-binding PCMH-type domain-containing protein {ECO:0000259|PROSITE:PS51387};
OS   Oryza glaberrima (African rice).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX   NCBI_TaxID=4538 {ECO:0000313|EnsemblPlants:ORGLA07G0047100.1, ECO:0000313|Proteomes:UP000007306};
RN   [1] {ECO:0000313|Proteomes:UP000007306}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=IRGC 96717 {ECO:0000313|Proteomes:UP000007306};
RA   Wing R.A., Yu Y., Rounsley S., Reddy-Marri P., Goicoechea J.L.,
RA   Sisneros N., Lee S., Song X., Angelova A., Kudrna D.P., de Baynast K.,
RA   Zuccolo A.;
RT   "The complete genome of Oryza glaberrima.";
RL   Submitted (JUN-2010) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EnsemblPlants:ORGLA07G0047100.1}
RP   IDENTIFICATION.
RG   EnsemblPlants;
RL   Submitted (JUN-2015) to UniProtKB.
CC   -!- COFACTOR:
CC       Name=FAD; Xref=ChEBI:CHEBI:57692;
CC         Evidence={ECO:0000256|ARBA:ARBA00001974};
CC   -!- SIMILARITY: Belongs to the FAD-binding oxidoreductase/transferase type
CC       4 family. {ECO:0000256|ARBA:ARBA00008000}.
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DR   AlphaFoldDB; I1Q8M9; -.
DR   STRING; 4538.I1Q8M9; -.
DR   EnsemblPlants; ORGLA07G0047100.1; ORGLA07G0047100.1; ORGLA07G0047100.
DR   Gramene; ORGLA07G0047100.1; ORGLA07G0047100.1; ORGLA07G0047100.
DR   eggNOG; KOG1232; Eukaryota.
DR   HOGENOM; CLU_017779_4_1_1; -.
DR   OMA; YNEDWMR; -.
DR   Proteomes; UP000007306; Unassembled WGS sequence.
DR   GO; GO:0051990; F:(R)-2-hydroxyglutarate dehydrogenase activity; IEA:EnsemblPlants.
DR   GO; GO:0047545; F:2-hydroxyglutarate dehydrogenase activity; IEA:EnsemblPlants.
DR   GO; GO:0071949; F:FAD binding; IEA:InterPro.
DR   GO; GO:0010230; P:alternative respiration; IEA:EnsemblPlants.
DR   GO; GO:0006807; P:nitrogen compound metabolic process; IEA:EnsemblPlants.
DR   GO; GO:0009853; P:photorespiration; IEA:EnsemblPlants.
DR   Gene3D; 3.30.465.10; -; 1.
DR   Gene3D; 3.30.70.2190; -; 1.
DR   Gene3D; 3.30.70.2740; -; 1.
DR   Gene3D; 3.30.43.10; Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2; 1.
DR   InterPro; IPR004113; FAD-bd_oxidored_4_C.
DR   InterPro; IPR016166; FAD-bd_PCMH.
DR   InterPro; IPR036318; FAD-bd_PCMH-like_sf.
DR   InterPro; IPR016167; FAD-bd_PCMH_sub1.
DR   InterPro; IPR016169; FAD-bd_PCMH_sub2.
DR   InterPro; IPR016164; FAD-linked_Oxase-like_C.
DR   InterPro; IPR006094; Oxid_FAD_bind_N.
DR   InterPro; IPR016171; Vanillyl_alc_oxidase_C-sub2.
DR   PANTHER; PTHR43716; D-2-HYDROXYGLUTARATE DEHYDROGENASE, MITOCHONDRIAL; 1.
DR   PANTHER; PTHR43716:SF1; D-2-HYDROXYGLUTARATE DEHYDROGENASE, MITOCHONDRIAL; 1.
DR   Pfam; PF02913; FAD-oxidase_C; 1.
DR   Pfam; PF01565; FAD_binding_4; 1.
DR   SUPFAM; SSF56176; FAD-binding/transporter-associated domain-like; 1.
DR   SUPFAM; SSF55103; FAD-linked oxidases, C-terminal domain; 1.
DR   PROSITE; PS51387; FAD_PCMH; 1.
PE   3: Inferred from homology;
KW   Oxidoreductase {ECO:0000256|ARBA:ARBA00023002}.
FT   DOMAIN          131..310
FT                   /note="FAD-binding PCMH-type"
FT                   /evidence="ECO:0000259|PROSITE:PS51387"
SQ   SEQUENCE   559 AA;  61111 MW;  3311EE913578DF73 CRC64;
     MARRAAAGLL RRHLGPLAAG ETLQARGMYP KQYGAANHAF SRFYSIQGQQ RSLYGFRTNV
     ETDDTQQSAR MNFEVQKRSF SSAAAHVQRN PAYSVLNSDD VSYFKSILGE SGVVQDEDRV
     AVANMDWMGK YKGSSQLLLL PKSTAEVSKI LSYCNSRRLA VVPQGGNTGL VGGSVPVYDE
     VIISLGGMDK IITFDNVNGI LTCEAGCVLE NLSSYVENKG FIMPLDLGAK GSCHIGGNIS
     TNAGGLRFIR YGSLHGSVLG LEVVLADGTV LDMLTTLRKD NTGYDLKHLF IGSEGSLGIV
     TKIAILTPAK LPSTNVAFLS CNDYISCQKL LLAARRSLGE ILSAFEFMDR HCINLAMKYL
     EGVHNPLPVS PYNFYVLIET TGSDESYDKA KLEAFLLRSM EDGLVADGVI AQDISQASNF
     WRIREGISEA SVKVGAVYKY DLSIPVEKLY DIVEEMRSRV GDMGQVLGYG HLGDGNLHLN
     ILSTKYSDKM LAQIEPFVYE WTSKQRGSIS AEHGLGLMKA EKIHYSKSSE AVQLMASIKK
     LLDPNSILNP YKVLPQSVL
//