ID I1QXG6_ORYGL Unreviewed; 820 AA.
AC I1QXG6;
DT 13-JUN-2012, integrated into UniProtKB/TrEMBL.
DT 13-JUN-2012, sequence version 1.
DT 24-JAN-2024, entry version 51.
DE RecName: Full=Pentacotripeptide-repeat region of PRORP domain-containing protein {ECO:0008006|Google:ProtNLM};
OS Oryza glaberrima (African rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=4538 {ECO:0000313|EnsemblPlants:ORGLA11G0020800.1, ECO:0000313|Proteomes:UP000007306};
RN [1] {ECO:0000313|Proteomes:UP000007306}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IRGC 96717 {ECO:0000313|Proteomes:UP000007306};
RA Wing R.A., Yu Y., Rounsley S., Reddy-Marri P., Goicoechea J.L.,
RA Sisneros N., Lee S., Song X., Angelova A., Kudrna D.P., de Baynast K.,
RA Zuccolo A.;
RT "The complete genome of Oryza glaberrima.";
RL Submitted (JUN-2010) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EnsemblPlants:ORGLA11G0020800.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (JUN-2015) to UniProtKB.
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DR AlphaFoldDB; I1QXG6; -.
DR STRING; 4538.I1QXG6; -.
DR EnsemblPlants; ORGLA11G0020800.1; ORGLA11G0020800.1; ORGLA11G0020800.
DR Gramene; ORGLA11G0020800.1; ORGLA11G0020800.1; ORGLA11G0020800.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_49_12_1; -.
DR OMA; RIKPLHN; -.
DR Proteomes; UP000007306; Unassembled WGS sequence.
DR GO; GO:0005739; C:mitochondrion; IEA:EnsemblPlants.
DR GO; GO:1990825; F:sequence-specific mRNA binding; IEA:EnsemblPlants.
DR GO; GO:0032981; P:mitochondrial respiratory chain complex I assembly; IEA:EnsemblPlants.
DR GO; GO:0000963; P:mitochondrial RNA processing; IEA:EnsemblPlants.
DR GO; GO:0008380; P:RNA splicing; IEA:EnsemblPlants.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 6.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 12.
DR PANTHER; PTHR47938:SF15; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR47938; RESPIRATORY COMPLEX I CHAPERONE (CIA84), PUTATIVE (AFU_ORTHOLOGUE AFUA_2G06020)-RELATED; 1.
DR Pfam; PF01535; PPR; 2.
DR Pfam; PF12854; PPR_1; 1.
DR Pfam; PF13041; PPR_2; 7.
DR PROSITE; PS51375; PPR; 12.
PE 4: Predicted;
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transit peptide {ECO:0000256|ARBA:ARBA00022946}.
FT REPEAT 236..270
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 271..305
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 306..340
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 341..375
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 376..410
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 411..445
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 446..480
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 481..515
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 516..550
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 551..585
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 586..620
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 706..740
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REGION 1..56
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..20
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 820 AA; 91930 MW; 29E0BB2AD56E5F25 CRC64;
APAPHHPAPA PPPPSQSQPK PTNLPRRRCF PRRRPRHPLH EPHLGTVPRG AAPLPALRRP
PRRRCLLPAP DPDLAVALLS WSQSPDHHVA LQDPTPLAHS ALLRLLARSR RFDAVDDTLQ
SMSLAGPAPT RACLGALVAA YADAGMLGKA TEMCERVREQ YGSLPVVTHC NRLLKLLVEQ
RRWDDARKLY DEMLAEENAA DNYSTCVLVR GLCLERRVEE GLKLIEARWG AGCIPHVVFY
NVLIDGYCRR GDMGRGLLLL GEMETKGFLP TLVTYGSLIN WLGKKGDLEK IGSLFLEMSK
RGLSPNVQIY NSVTDALCKC RSATQAMVIL KQMFASGRDP DIITFNTLIT GLCHEGHVQK
AEHFLREAIR RELNPNQFSY TPLIHGFCMR GELMTASDLL VEMMGRGHTP DVVTFGALIH
GLVVAGKVSE ALIVREKMTE RQVFPDVNIY NVLISGLCKK HMLPAAKNIL EEMLEKNVQP
DVFVYATLID GFIRSENLGD ARKIFEFMEH KGVRPDIVSC NAMIKGYCQF GMMSEAILCM
SNMRKVGCIP DEFTYTTVIS GYAKQGNLNG ALRWLCDMIK RKCKPNVVTY SSLINGYCKT
GDTDSAEGLF ANMQAEALSP NVVTYTILIG SLFKKDKVLR AGLYFETMLL NHCSPNDVTL
HYLVNGLTSC TPCVINSIWC NISEVHGKDA LLVVFKKLVF DIGDPRNSAY NAIIFSLCRH
NMLREALDFK NRMAKKGYVP NPITFLSLLY GFCSVGKSMN WRTILPNEFQ QEEFEIIFRY
KFLFDQYATE SVCCEVSRVL QQYLAECKSL QRVEQKFANS
//