ID I1SKZ3_ONCMY Unreviewed; 346 AA.
AC I1SKZ3;
DT 11-JUL-2012, integrated into UniProtKB/TrEMBL.
DT 11-JUL-2012, sequence version 1.
DT 27-MAR-2024, entry version 21.
DE SubName: Full=TNF receptor superfamily member 5B {ECO:0000313|EMBL:ADE40849.1};
DE Flags: Fragment;
GN Name=TNFRSF5B {ECO:0000313|EMBL:ADE40849.1};
OS Oncorhynchus mykiss (Rainbow trout) (Salmo gairdneri).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes;
OC Salmonidae; Salmoninae; Oncorhynchus.
OX NCBI_TaxID=8022 {ECO:0000313|EMBL:ADE40849.1};
RN [1] {ECO:0000313|EMBL:ADE40849.1}
RP NUCLEOTIDE SEQUENCE.
RA Zhang Y.-A., Sunyer O.;
RT "Identification and characterization of CD40 homologs in rainbow trout,
RT Oncorhynchus mykiss.";
RL Submitted (MAY-2009) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; GQ169788; ADE40849.1; -; mRNA.
DR AlphaFoldDB; I1SKZ3; -.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
DR CDD; cd13422; TNFRSF5_teleost; 1.
DR Gene3D; 2.10.50.10; Tumor Necrosis Factor Receptor, subunit A, domain 2; 3.
DR InterPro; IPR001368; TNFR/NGFR_Cys_rich_reg.
DR InterPro; IPR034053; TNFRSF5_N_teleost.
DR PANTHER; PTHR46875:SF2; CD40 MOLECULE, TNF RECEPTOR SUPERFAMILY MEMBER 5; 1.
DR PANTHER; PTHR46875; TUMOR NECROSIS FACTOR RECEPTOR SUPERFAMILY MEMBER 5; 1.
DR Pfam; PF00020; TNFR_c6; 1.
DR SMART; SM00208; TNFR; 3.
DR SUPFAM; SSF57586; TNF receptor-like; 2.
PE 2: Evidence at transcript level;
KW Membrane {ECO:0000256|SAM:Phobius}; Receptor {ECO:0000313|EMBL:ADE40849.1};
KW Signal {ECO:0000256|SAM:SignalP}; Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT SIGNAL 1..21
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 22..346
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5003653033"
FT TRANSMEM 191..214
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 22..56
FT /note="TNFR-Cys"
FT /evidence="ECO:0000259|SMART:SM00208"
FT DOMAIN 102..140
FT /note="TNFR-Cys"
FT /evidence="ECO:0000259|SMART:SM00208"
FT DOMAIN 143..182
FT /note="TNFR-Cys"
FT /evidence="ECO:0000259|SMART:SM00208"
FT REGION 239..258
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 264..346
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 277..296
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 306..336
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:ADE40849.1"
SQ SEQUENCE 346 AA; 37886 MW; CB74606D20F4CE8A CRC64;
TKRIEMVTLL FMLAVFPAVY SCDPATQYDN NGECCNKCGP GTRMSSDHSG CFDPHCMPCQ
ENEYQEAFTE KIICKVQPYC DQNKNFEGST NRSKTSLSQC ICKAGHHCSS KECLTCVPHT
KCGPGQETLY TGDHIRDTVC QACPANTFSS DSSAESKCKQ WTVCDKGSKT EANGTSTSDI
VCVLVPTFSG RIAGCSLVVV ALVTSVVGII LWKYKGKHGE AYKKGKEPCV ECLGWERRPT
EDKNNEGRNS EGPDEEREQL KPMIQNGKPL SPPSPGTQTP VENDVNDSQA ESSAKTEEMT
ENGHVVAQEQ GKQHNTYLSD PQMVSHNHSA LPSAEHNIQW SDCALP
//
