GenomeNet

Database: UniProt
Entry: I1YI55_METFJ
LinkDB: I1YI55_METFJ
Original site: I1YI55_METFJ 
ID   I1YI55_METFJ            Unreviewed;       841 AA.
AC   I1YI55;
DT   11-JUL-2012, integrated into UniProtKB/TrEMBL.
DT   11-JUL-2012, sequence version 1.
DT   24-JAN-2024, entry version 65.
DE   SubName: Full=Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:AFJ02598.1};
GN   OrderedLocusNames=Q7C_1449 {ECO:0000313|EMBL:AFJ02598.1};
OS   Methylophaga frappieri (strain ATCC BAA-2434 / DSM 25690 / JAM7).
OC   Bacteria; Pseudomonadota; Gammaproteobacteria; Thiotrichales;
OC   Piscirickettsiaceae; Methylophaga.
OX   NCBI_TaxID=754477 {ECO:0000313|EMBL:AFJ02598.1, ECO:0000313|Proteomes:UP000009145};
RN   [1] {ECO:0000313|EMBL:AFJ02598.1, ECO:0000313|Proteomes:UP000009145}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=JAM7 {ECO:0000313|EMBL:AFJ02598.1,
RC   ECO:0000313|Proteomes:UP000009145};
RX   PubMed=22815445; DOI=10.1128/JB.00726-12;
RA   Villeneuve C., Martineau C., Mauffrey F., Villemur R.;
RT   "Complete genome sequences of Methylophaga sp. strain JAM1 and Methylophaga
RT   sp. strain JAM7.";
RL   J. Bacteriol. 194:4126-4127(2012).
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; CP003380; AFJ02598.1; -; Genomic_DNA.
DR   RefSeq; WP_014704018.1; NC_017856.1.
DR   AlphaFoldDB; I1YI55; -.
DR   STRING; 754477.Q7C_1449; -.
DR   KEGG; mec:Q7C_1449; -.
DR   PATRIC; fig|754477.3.peg.1429; -.
DR   eggNOG; COG5001; Bacteria.
DR   HOGENOM; CLU_000445_70_50_6; -.
DR   OMA; DMACYMA; -.
DR   OrthoDB; 9813913at2; -.
DR   Proteomes; UP000009145; Chromosome.
DR   GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR   CDD; cd01948; EAL; 1.
DR   CDD; cd01949; GGDEF; 1.
DR   CDD; cd00130; PAS; 1.
DR   Gene3D; 3.30.70.270; -; 1.
DR   Gene3D; 3.20.20.450; EAL domain; 1.
DR   Gene3D; 3.30.450.20; PAS domain; 1.
DR   InterPro; IPR001633; EAL_dom.
DR   InterPro; IPR035919; EAL_sf.
DR   InterPro; IPR000160; GGDEF_dom.
DR   InterPro; IPR029787; Nucleotide_cyclase.
DR   InterPro; IPR001610; PAC.
DR   InterPro; IPR000014; PAS.
DR   InterPro; IPR000700; PAS-assoc_C.
DR   InterPro; IPR035965; PAS-like_dom_sf.
DR   InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR   NCBIfam; TIGR00254; GGDEF; 1.
DR   NCBIfam; TIGR00229; sensory_box; 1.
DR   PANTHER; PTHR44757:SF4; DIGUANYLATE CYCLASE DGCE-RELATED; 1.
DR   PANTHER; PTHR44757; DIGUANYLATE CYCLASE DGCP; 1.
DR   Pfam; PF00563; EAL; 1.
DR   Pfam; PF00990; GGDEF; 1.
DR   Pfam; PF13426; PAS_9; 1.
DR   SMART; SM00052; EAL; 1.
DR   SMART; SM00267; GGDEF; 1.
DR   SMART; SM00086; PAC; 1.
DR   SMART; SM00091; PAS; 1.
DR   SUPFAM; SSF141868; EAL domain-like; 1.
DR   SUPFAM; SSF55073; Nucleotide cyclase; 1.
DR   SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR   PROSITE; PS50883; EAL; 1.
DR   PROSITE; PS50887; GGDEF; 1.
DR   PROSITE; PS50113; PAC; 1.
DR   PROSITE; PS50112; PAS; 1.
PE   4: Predicted;
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000009145};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM        72..91
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        97..114
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        134..154
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        160..179
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        212..233
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   DOMAIN          288..334
FT                   /note="PAS"
FT                   /evidence="ECO:0000259|PROSITE:PS50112"
FT   DOMAIN          361..413
FT                   /note="PAC"
FT                   /evidence="ECO:0000259|PROSITE:PS50113"
FT   DOMAIN          442..577
FT                   /note="GGDEF"
FT                   /evidence="ECO:0000259|PROSITE:PS50887"
FT   DOMAIN          588..841
FT                   /note="EAL"
FT                   /evidence="ECO:0000259|PROSITE:PS50883"
SQ   SEQUENCE   841 AA;  93884 MW;  52FB8D71D501B4BA CRC64;
     MKIAACITEN QGIYVKISMV KKSFFYQQSK RNSVGHSADF TLIKSELEET ASMDGAALPR
     QQAFLLSQQA PFANLTVIAV AWLMALVFGQ YDFSGLLQVW AGVISFFSGI RLVLWWRYQR
     GAESISVHRW IRQYTWATLF VGLAWGALSL FYLAATDPQI SSLFYILIST VLAAAVPVLA
     ASLTAFVAYT LPPVLMLIMV TAYQVFSQQQ ASSLPLFLVA GLTAYYLFMI SLVRRANQNI
     TDSFRLQQSH EALLADLQWE VAQRESQIEA RTLALTEANT RLSEKQAHLQ KLSRAVEASP
     NGIIITDRQG FIEYVNPRCE KITGYSQAEA LGKTPRLFKV QFSNPGRIRS LWQTIQAGRQ
     WVGEFSSRRH NGPVYWAKVY IAPIRSVNQE ISHFVAILED VSEAHSLAQA LSHQATHDPL
     TGLINRSEFE RRLTALNLQN TDQHALCYLD LDLFKVINET AGHTAGDALL SQLSGYLSQF
     IGPQETLARL GGDEFALLME SSDLEHAKTV AEEIRYGIDS FTFFWQSKEL TTTASIGVAM
     IEDEASNNAD KDPLKRAESA CNAAKQFGRN CVYVFQNDDA MLAEQSGEFQ WVQKIKHALS
     ESRLMLYTQP IQGLHDNANT LKYEVLLRMR DETDQIISPG VFLPIAERYN LADKIDRWVI
     DTVIDWLTHH HQALPFNQTL AINLSGSSMG NQALLTHISQ RLHDAVFPVS MLSFEITETA
     AIANVDQAKQ FIQVLRNVGC HFALDDFGSG LSSFAYLKNL PVSAIKIDGL FVRDMLTDPI
     DAQMVRAINE IGHVMGLETI AEFVENAEVL HSLESIGVDY AQGFHIGKPA PIDSLLTTKT
     C
//
DBGET integrated database retrieval system