ID I3J134_ORENI Unreviewed; 300 AA.
AC I3J134;
DT 11-JUL-2012, integrated into UniProtKB/TrEMBL.
DT 11-JUL-2012, sequence version 1.
DT 27-MAR-2024, entry version 64.
DE SubName: Full=Y-box binding protein 1 {ECO:0000313|Ensembl:ENSONIP00000002574.1};
GN Name=ybx1 {ECO:0000313|Ensembl:ENSONIP00000002574.1};
OS Oreochromis niloticus (Nile tilapia) (Tilapia nilotica).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids;
OC Pseudocrenilabrinae; Oreochromini; Oreochromis.
OX NCBI_TaxID=8128 {ECO:0000313|Ensembl:ENSONIP00000002574.1, ECO:0000313|Proteomes:UP000005207};
RN [1] {ECO:0000313|Proteomes:UP000005207}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RG Broad Institute Genome Assembly Team;
RG Broad Institute Sequencing Platform;
RA Di Palma F., Johnson J., Lander E.S., Lindblad-Toh K.;
RT "The Genome Sequence of Oreochromis niloticus (Nile Tilapia).";
RL Submitted (JAN-2012) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Ensembl:ENSONIP00000002574.1}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR RefSeq; XP_005478354.1; XM_005478297.2.
DR AlphaFoldDB; I3J134; -.
DR SMR; I3J134; -.
DR STRING; 8128.ENSONIP00000037722; -.
DR Ensembl; ENSONIT00000002575.2; ENSONIP00000002574.1; ENSONIG00000002062.2.
DR GeneID; 100693608; -.
DR CTD; 4904; -.
DR eggNOG; KOG3070; Eukaryota.
DR GeneTree; ENSGT00940000153341; -.
DR HOGENOM; CLU_063071_1_0_1; -.
DR OrthoDB; 5487692at2759; -.
DR TreeFam; TF317306; -.
DR Proteomes; UP000005207; Linkage group LG20.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR CDD; cd04458; CSP_CDS; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR InterPro; IPR011129; CSD.
DR InterPro; IPR019844; CSD_1.
DR InterPro; IPR002059; CSP_DNA-bd.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR PANTHER; PTHR11544; COLD SHOCK DOMAIN CONTAINING PROTEINS; 1.
DR PANTHER; PTHR11544:SF68; Y-BOX-BINDING PROTEIN 1; 1.
DR Pfam; PF00313; CSD; 1.
DR PRINTS; PR00050; COLDSHOCK.
DR SMART; SM00357; CSP; 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR PROSITE; PS00352; CSD_1; 1.
DR PROSITE; PS51857; CSD_2; 1.
PE 4: Predicted;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000005207}.
FT DOMAIN 39..108
FT /note="CSD"
FT /evidence="ECO:0000259|PROSITE:PS51857"
FT REGION 1..32
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 102..300
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..16
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 153..167
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 224..240
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 300 AA; 33103 MW; 1A8D2BEF74259A4E CRC64;
MSSEAETQQQ PPQPAADAES PSSPAAAASA GDKKVIATKV LGTVKWFNVR NGYGFINRND
TKEDVFVHQT AIKKNNPRKY LRSVGDGETV EFDVVEGEKG AEAANVTGPG GVAVQGSKYA
ADRNRYRRYP RRRGPPRGGE YPENYQSDGE GEQGSGGRDK SREGGENAPE GDSQQQQRRP
TYPGRRRYPP YFGGEGDENQ GGQDQGNKPA RQNYYRGFRP RGPPRPRPVR DVEEDKENQG
GEGGQNQQPR QRRYRRNFNY RRRRQQTGGK PGQENKEAKT GGDTSAEKTS APEAQQGGAE
//
