ID I3JPU8_ORENI Unreviewed; 353 AA.
AC I3JPU8;
DT 11-JUL-2012, integrated into UniProtKB/TrEMBL.
DT 11-JUL-2012, sequence version 1.
DT 27-MAR-2024, entry version 54.
DE SubName: Full=Sox30 protein {ECO:0000313|Ensembl:ENSONIP00000010892.1};
GN Name=sox30 {ECO:0000313|Ensembl:ENSONIP00000010892.1};
OS Oreochromis niloticus (Nile tilapia) (Tilapia nilotica).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids;
OC Pseudocrenilabrinae; Oreochromini; Oreochromis.
OX NCBI_TaxID=8128 {ECO:0000313|Ensembl:ENSONIP00000010892.1, ECO:0000313|Proteomes:UP000005207};
RN [1] {ECO:0000313|Proteomes:UP000005207}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RG Broad Institute Genome Assembly Team;
RG Broad Institute Sequencing Platform;
RA Di Palma F., Johnson J., Lander E.S., Lindblad-Toh K.;
RT "The Genome Sequence of Oreochromis niloticus (Nile Tilapia).";
RL Submitted (JAN-2012) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Ensembl:ENSONIP00000010892.1}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
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DR RefSeq; XP_003447014.1; XM_003446966.4.
DR AlphaFoldDB; I3JPU8; -.
DR STRING; 8128.ENSONIP00000010892; -.
DR Ensembl; ENSONIT00000010901.2; ENSONIP00000010892.1; ENSONIG00000008664.2.
DR GeneID; 100533980; -.
DR KEGG; onl:100533980; -.
DR CTD; 11063; -.
DR eggNOG; KOG0527; Eukaryota.
DR GeneTree; ENSGT00940000161042; -.
DR HOGENOM; CLU_785164_0_0_1; -.
DR InParanoid; I3JPU8; -.
DR OMA; KNIHSHQ; -.
DR OrthoDB; 2902801at2759; -.
DR Proteomes; UP000005207; Linkage group LG10.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-UniRule.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR Gene3D; 1.10.30.10; High mobility group box domain; 1.
DR InterPro; IPR009071; HMG_box_dom.
DR InterPro; IPR036910; HMG_box_dom_sf.
DR PANTHER; PTHR47279; TRANSCRIPTION FACTOR SOX-30; 1.
DR PANTHER; PTHR47279:SF1; TRANSCRIPTION FACTOR SOX-30; 1.
DR Pfam; PF00505; HMG_box; 1.
DR SMART; SM00398; HMG; 1.
DR SUPFAM; SSF47095; HMG-box; 1.
DR PROSITE; PS50118; HMG_BOX_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00267};
KW Nucleus {ECO:0000256|PROSITE-ProRule:PRU00267};
KW Reference proteome {ECO:0000313|Proteomes:UP000005207}.
FT DOMAIN 124..192
FT /note="HMG box"
FT /evidence="ECO:0000259|PROSITE:PS50118"
FT DNA_BIND 124..192
FT /note="HMG box"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00267"
FT REGION 1..58
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 333..353
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..16
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 353 AA; 39556 MW; 428F284D5DE94847 CRC64;
METNSKKIKQ EASAEEGSSK HPWLSVSPGQ ETFQDCPVRK KGHQTGISGP TTPGNKTSLA
SVETGHSGMF QGCGVGGYMK AEPDHFTQTS PTQGDDIPAV CLTIQPTEED IKQMQTGRDA
TGYIKRPLNA FMVWAHIHRK VLQKTMTRAS IKNINIQLGL EWSKLSKEQQ EPYFQVAQKL
KNIHSHQFPD YEYQPRKRMR RENFTPVREV RQDGGQHQSS VSFFSPQEKT TLCSAQPTWP
VPIISSLAPV HYNPYYLLPV PYVSSLSYHI DLARSFMEEG RDHHCIYLQT GQIVPAFLSG
ETAQQPNSTQ KVLSGSFTLE SHTQPSVITN QQLSSNRNEA NKSEEDIDVV GLL
//
