ID I3JS60_ORENI Unreviewed; 827 AA.
AC I3JS60;
DT 11-JUL-2012, integrated into UniProtKB/TrEMBL.
DT 17-JUN-2020, sequence version 2.
DT 27-MAR-2024, entry version 57.
DE SubName: Full=Cold shock domain containing E1 {ECO:0000313|Ensembl:ENSONIP00000011705.2};
OS Oreochromis niloticus (Nile tilapia) (Tilapia nilotica).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata;
OC Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids;
OC Pseudocrenilabrinae; Oreochromini; Oreochromis.
OX NCBI_TaxID=8128 {ECO:0000313|Ensembl:ENSONIP00000011705.2, ECO:0000313|Proteomes:UP000005207};
RN [1] {ECO:0000313|Proteomes:UP000005207}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RG Broad Institute Genome Assembly Team;
RG Broad Institute Sequencing Platform;
RA Di Palma F., Johnson J., Lander E.S., Lindblad-Toh K.;
RT "The Genome Sequence of Oreochromis niloticus (Nile Tilapia).";
RL Submitted (JAN-2012) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Ensembl:ENSONIP00000011705.2}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
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DR AlphaFoldDB; I3JS60; -.
DR STRING; 8128.ENSONIP00000052211; -.
DR Ensembl; ENSONIT00000011714.2; ENSONIP00000011705.2; ENSONIG00000009309.2.
DR eggNOG; ENOG502QSJ1; Eukaryota.
DR GeneTree; ENSGT00390000016950; -.
DR HOGENOM; CLU_012335_1_0_1; -.
DR TreeFam; TF324707; -.
DR Proteomes; UP000005207; Linkage group LG20.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR CDD; cd04458; CSP_CDS; 2.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 7.
DR InterPro; IPR011129; CSD.
DR InterPro; IPR019844; CSD_1.
DR InterPro; IPR002059; CSP_DNA-bd.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR024642; SUZ-C.
DR PANTHER; PTHR12913:SF2; COLD SHOCK DOMAIN-CONTAINING PROTEIN E1 ISOFORM X1; 1.
DR PANTHER; PTHR12913; UNR PROTEIN N-RAS UPSTREAM GENE PROTEIN; 1.
DR Pfam; PF00313; CSD; 5.
DR Pfam; PF12901; SUZ-C; 1.
DR SMART; SM00357; CSP; 5.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 5.
DR PROSITE; PS00352; CSD_1; 4.
DR PROSITE; PS51857; CSD_2; 5.
DR PROSITE; PS51938; SUZ_C; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000005207}.
FT DOMAIN 25..89
FT /note="CSD"
FT /evidence="ECO:0000259|PROSITE:PS51857"
FT DOMAIN 202..264
FT /note="CSD"
FT /evidence="ECO:0000259|PROSITE:PS51857"
FT DOMAIN 366..440
FT /note="CSD"
FT /evidence="ECO:0000259|PROSITE:PS51857"
FT DOMAIN 547..610
FT /note="CSD"
FT /evidence="ECO:0000259|PROSITE:PS51857"
FT DOMAIN 702..766
FT /note="CSD"
FT /evidence="ECO:0000259|PROSITE:PS51857"
FT DOMAIN 777..818
FT /note="SUZ-C"
FT /evidence="ECO:0000259|PROSITE:PS51938"
FT REGION 804..827
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 827 AA; 91936 MW; 25FD1BB00C3CCF0E CRC64;
MSFDPGMLHN NGHTAYANGS GPGIRETGVV EKLLTSYGFI QCSERQARLF FHCSQYNGNL
QELKIGDDVE FEVSSDRRTG KPIAVKLLKI KPEVLPEERI SGQVGPDLHA YPFTVLHGYI
HPVVSSIPLH LDGKSAPGQV PTGSVCYERN GEVFYLTYTP DDVEGNIHLD TGDKVSFYME
TNKHTGAVSA RNIQLVKKKQ MRCQGVVCAT KEAFGFIERA DVVKEIFFHY SEFKGDLEAL
QAGDDVEFTI KDRNGKEVAT DVRLLPQGTV IFEDISIEQF EGTVVKVIPK VPTKNQNDPL
PGRVSVRMGF NDKELPFGEK DTKTKVTLLE GDHIQFNIST DRRDKLERAT NIEILPDTFK
FTKENREMGV IAAIRDGFGF IKCVDRDARM FFHFSEVLEE GQLHISDEVE FTVVPVGPVY
KLFKKDMLSA QRNHAVRIKK LPKGTVSFHI QSEQRFVGVV EKEVVGNTAK NISPTKGKEK
ESEEGVIAYE DCGVKLTVPY HAKDLEGGSH PQVGDKVEFS INEVKRTGQQ SAVSIRVLNR
NASGAKRLHG FVAALKDNFG FIETANHDQE VFFHYSEMCG DLDNLDLGDT VEYNLSKGKG
NKVSAEKVTK VSAVNGIGED VGGTVMTGKV IRPIRSVDPS QTEYQGLVEF SEEGGSKMQN
YPFGIMSMAN KSDCLQKGEQ VKFQVCTITQ TGQKMACNVV PQRRAMVECV KDQFGFITYE
VGDSKKLFFH VKEVQDGLEL QTGDEVEFSV VLNQRTGKCS ACNVRRVSEG PKPVATPRPD
RLVNRLKSIT LDDASAPRLV IVRQPRGPDN SKGFNVERKT RQPGVID
//
