UniProt: I3R146

Database: UniProt
Entry: I3R146_HALMT

LinkDB:  I3R146_HALMT 
Original site:  I3R146_HALMT

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Ontology (4)   
   GO (4)   
Gene (2)   
   KEGG GENES (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (4)   
   EMBL (4)   
Protein domain (6)   
   InterPro (3)   
   Pfam (1)   
   PROSITE (2)   
Literature (3)   
   PubMed (3)   
All databases (20)   

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ID   I3R146_HALMT            Unreviewed;       107 AA.
AC   I3R146;
DT   05-SEP-2012, integrated into UniProtKB/TrEMBL.
DT   05-SEP-2012, sequence version 1.
DT   27-MAR-2024, entry version 60.
DE   RecName: Full=Zinc-containing ferredoxin {ECO:0000256|PIRNR:PIRNR000068};
GN   OrderedLocusNames=HFX_0215 {ECO:0000313|EMBL:AFK17956.1};
GN   ORFNames=BM92_08180 {ECO:0000313|EMBL:AHZ22622.1}, C439_09295
GN   {ECO:0000313|EMBL:EMA02766.1}, E6P09_04185
GN   {ECO:0000313|EMBL:QCQ74508.1};
OS   Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC
OS   14739 / NCIMB 2177 / R-4) (Halobacterium mediterranei).
OC   Archaea; Euryarchaeota; Stenosarchaea group; Halobacteria; Haloferacales;
OC   Haloferacaceae; Haloferax.
OX   NCBI_TaxID=523841 {ECO:0000313|EMBL:AFK17956.1, ECO:0000313|Proteomes:UP000006469};
RN   [1] {ECO:0000313|EMBL:AFK17956.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=CGMCC 1.2087 {ECO:0000313|EMBL:AFK17956.1};
RX   PubMed=22247127; DOI=10.1128/AEM.07114-11;
RA   Cai S., Cai L., Liu H., Liu X., Han J., Zhou J., Xiang H.;
RT   "Identification of the haloarchaeal phasin (PhaP) that functions in
RT   polyhydroxyalkanoate accumulation and granule formation in Haloferax
RT   mediterranei.";
RL   Appl. Environ. Microbiol. 78:1946-1952(2012).
RN   [2] {ECO:0000313|EMBL:AFK17956.1, ECO:0000313|Proteomes:UP000006469}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 /
RC   R-4 {ECO:0000313|Proteomes:UP000006469}, and CGMCC 1.2087
RC   {ECO:0000313|EMBL:AFK17956.1};
RX   PubMed=22843593; DOI=10.1128/JB.00880-12;
RA   Han J., Zhang F., Hou J., Liu X., Li M., Liu H., Cai L., Zhang B., Chen Y.,
RA   Zhou J., Hu S., Xiang H.;
RT   "Complete genome sequence of the metabolically versatile halophilic
RT   archaeon Haloferax mediterranei, a poly(3-hydroxybutyrate-co-3-
RT   hydroxyvalerate) producer.";
RL   J. Bacteriol. 194:4463-4464(2012).
RN   [3] {ECO:0000313|Proteomes:UP000011603}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 /
RC   R-4 {ECO:0000313|Proteomes:UP000011603};
RA   Becker E.A., Seitzer P., Tritt A., Larsen D., Yao A., Wu D., Darling A.,
RA   Eisen J.A., Facciotti M.T.;
RL   Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
RN   [4] {ECO:0000313|EMBL:EMA02766.1, ECO:0000313|Proteomes:UP000011603}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 33500 {ECO:0000313|EMBL:EMA02766.1}, and ATCC 33500 / DSM
RC   1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4
RC   {ECO:0000313|Proteomes:UP000011603};
RX   PubMed=25393412; DOI=10.1371/journal.pgen.1004784;
RA   Becker E.A., Seitzer P.M., Tritt A., Larsen D., Krusor M., Yao A.I., Wu D.,
RA   Madern D., Eisen J.A., Darling A.E., Facciotti M.T.;
RT   "Phylogenetically driven sequencing of extremely halophilic archaea reveals
RT   strategies for static and dynamic osmo-response.";
RL   PLoS Genet. 10:E1004784-E1004784(2014).
RN   [5] {ECO:0000313|EMBL:AHZ22622.1, ECO:0000313|Proteomes:UP000027075}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 33500 {ECO:0000313|EMBL:AHZ22622.1}, and ATCC 33500 / DSM
RC   1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4
RC   {ECO:0000313|Proteomes:UP000027075};
RA   Bautista V.;
RT   "Transcriptional profiles of Haloferax mediterranei on the basis of
RT   nitrogen availability.";
RL   Submitted (APR-2014) to the EMBL/GenBank/DDBJ databases.
RN   [6] {ECO:0000313|EMBL:AFK17956.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=CGMCC 1.2087;
RA   Wang L., Yang H., Xiang H.;
RL   Submitted (MAY-2014) to the EMBL/GenBank/DDBJ databases.
RN   [7] {ECO:0000313|EMBL:QCQ74508.1, ECO:0000313|Proteomes:UP000299011}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 33500 {ECO:0000313|EMBL:QCQ74508.1}, and ATCC 33500 / DSM
RC   1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4
RC   {ECO:0000313|Proteomes:UP000299011};
RA   DasSarma S., DasSarma P., DasSarma S., Fomenkov A., Vincze T., Anton B.P.,
RA   Roberts R.J.;
RT   "Methylomes of two halophilic Archaea, Haloarcula marismortui and Haloferax
RT   mediterranei.";
RL   Submitted (APR-2019) to the EMBL/GenBank/DDBJ databases.
CC   -!- FUNCTION: Ferredoxins are iron-sulfur proteins that transfer electrons
CC       in a wide variety of metabolic reactions.
CC       {ECO:0000256|PIRNR:PIRNR000068}.
CC   -!- COFACTOR:
CC       Name=Zn(2+); Xref=ChEBI:CHEBI:29105;
CC         Evidence={ECO:0000256|PIRNR:PIRNR000068,
CC         ECO:0000256|PIRSR:PIRSR000068-1};
CC       Note=Binds 1 zinc ion. {ECO:0000256|PIRNR:PIRNR000068,
CC       ECO:0000256|PIRSR:PIRSR000068-1};
CC   -!- COFACTOR:
CC       Name=[3Fe-4S] cluster; Xref=ChEBI:CHEBI:21137;
CC         Evidence={ECO:0000256|PIRNR:PIRNR000068,
CC         ECO:0000256|PIRSR:PIRSR000068-1};
CC       Note=Binds 1 [3Fe-4S] cluster. {ECO:0000256|PIRNR:PIRNR000068,
CC       ECO:0000256|PIRSR:PIRSR000068-1};
CC   -!- COFACTOR:
CC       Name=[4Fe-4S] cluster; Xref=ChEBI:CHEBI:49883;
CC         Evidence={ECO:0000256|PIRNR:PIRNR000068,
CC         ECO:0000256|PIRSR:PIRSR000068-1};
CC       Note=Binds 1 [4Fe-4S] cluster. {ECO:0000256|PIRNR:PIRNR000068,
CC       ECO:0000256|PIRSR:PIRSR000068-1};
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DR   EMBL; CP001868; AFK17956.1; -; Genomic_DNA.
DR   EMBL; CP007551; AHZ22622.1; -; Genomic_DNA.
DR   EMBL; AOLO01000007; EMA02766.1; -; Genomic_DNA.
DR   EMBL; CP039139; QCQ74508.1; -; Genomic_DNA.
DR   RefSeq; WP_004058394.1; NZ_CP039139.1.
DR   AlphaFoldDB; I3R146; -.
DR   STRING; 523841.HFX_0215; -.
DR   PaxDb; 523841-HFX_0215; -.
DR   GeneID; 40155588; -.
DR   KEGG; hme:HFX_0215; -.
DR   PATRIC; fig|523841.21.peg.1889; -.
DR   eggNOG; arCOG04548; Archaea.
DR   HOGENOM; CLU_178207_0_0_2; -.
DR   OrthoDB; 23833at2157; -.
DR   Proteomes; UP000006469; Chromosome.
DR   Proteomes; UP000011603; Unassembled WGS sequence.
DR   Proteomes; UP000027075; Chromosome.
DR   Proteomes; UP000299011; Chromosome.
DR   GO; GO:0051538; F:3 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.
DR   GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.
DR   GO; GO:0009055; F:electron transfer activity; IEA:InterPro.
DR   GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR   Gene3D; 3.30.70.20; -; 1.
DR   InterPro; IPR017896; 4Fe4S_Fe-S-bd.
DR   InterPro; IPR017900; 4Fe4S_Fe_S_CS.
DR   InterPro; IPR009157; Fd_Zn-bd.
DR   PANTHER; PTHR43687; ADENYLYLSULFATE REDUCTASE, BETA SUBUNIT; 1.
DR   PANTHER; PTHR43687:SF1; L-ASPARTATE SEMIALDEHYDE SULFURTRANSFERASE IRON-SULFUR SUBUNIT; 1.
DR   Pfam; PF13187; Fer4_9; 1.
DR   PIRSF; PIRSF000068; Zn_Fdx_Sulfol; 1.
DR   SUPFAM; SSF54862; 4Fe-4S ferredoxins; 1.
DR   PROSITE; PS00198; 4FE4S_FER_1; 1.
DR   PROSITE; PS51379; 4FE4S_FER_2; 2.
PE   4: Predicted;
KW   3Fe-4S {ECO:0000256|PIRNR:PIRNR000068, ECO:0000256|PIRSR:PIRSR000068-1};
KW   4Fe-4S {ECO:0000256|PIRNR:PIRNR000068, ECO:0000256|PIRSR:PIRSR000068-1};
KW   Electron transport {ECO:0000256|ARBA:ARBA00022982,
KW   ECO:0000256|PIRNR:PIRNR000068};
KW   Iron {ECO:0000256|PIRNR:PIRNR000068, ECO:0000256|PIRSR:PIRSR000068-1};
KW   Iron-sulfur {ECO:0000256|PIRNR:PIRNR000068, ECO:0000256|PIRSR:PIRSR000068-
KW   1};
KW   Metal-binding {ECO:0000256|PIRNR:PIRNR000068,
KW   ECO:0000256|PIRSR:PIRSR000068-1};
KW   Transport {ECO:0000256|PIRNR:PIRNR000068};
KW   Zinc {ECO:0000256|ARBA:ARBA00022833, ECO:0000256|PIRNR:PIRNR000068}.
FT   DOMAIN          37..66
FT                   /note="4Fe-4S ferredoxin-type"
FT                   /evidence="ECO:0000259|PROSITE:PS51379"
FT   DOMAIN          74..104
FT                   /note="4Fe-4S ferredoxin-type"
FT                   /evidence="ECO:0000259|PROSITE:PS51379"
FT   BINDING         35
FT                   /ligand="Zn(2+)"
FT                   /ligand_id="ChEBI:CHEBI:29105"
FT                   /evidence="ECO:0000256|PIRSR:PIRSR000068-1"
FT   BINDING         46
FT                   /ligand="[3Fe-4S] cluster"
FT                   /ligand_id="ChEBI:CHEBI:21137"
FT                   /evidence="ECO:0000256|PIRSR:PIRSR000068-1"
FT   BINDING         52
FT                   /ligand="[3Fe-4S] cluster"
FT                   /ligand_id="ChEBI:CHEBI:21137"
FT                   /evidence="ECO:0000256|PIRSR:PIRSR000068-1"
FT   BINDING         56
FT                   /ligand="[4Fe-4S] cluster"
FT                   /ligand_id="ChEBI:CHEBI:49883"
FT                   /evidence="ECO:0000256|PIRSR:PIRSR000068-1"
FT   BINDING         84
FT                   /ligand="[4Fe-4S] cluster"
FT                   /ligand_id="ChEBI:CHEBI:49883"
FT                   /evidence="ECO:0000256|PIRSR:PIRSR000068-1"
FT   BINDING         87
FT                   /ligand="[4Fe-4S] cluster"
FT                   /ligand_id="ChEBI:CHEBI:49883"
FT                   /evidence="ECO:0000256|PIRSR:PIRSR000068-1"
FT   BINDING         90
FT                   /ligand="[4Fe-4S] cluster"
FT                   /ligand_id="ChEBI:CHEBI:49883"
FT                   /evidence="ECO:0000256|PIRSR:PIRSR000068-1"
FT   BINDING         94
FT                   /ligand="[3Fe-4S] cluster"
FT                   /ligand_id="ChEBI:CHEBI:21137"
FT                   /evidence="ECO:0000256|PIRSR:PIRSR000068-1"
SQ   SEQUENCE   107 AA;  11694 MW;  0FCF1F154007EBD9 CRC64;
     MAIDPNFDQN RERVGEEDGV AVWGPVEPPE KLGIHGTHVA VDYDICLADG ACLENCPVDV
     FTWVDTPDHP VSELKVEPTN EDQCIDCMLC VDICPVDAID VDASRQA
//

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