ID I3V6S3_PERCA Unreviewed; 85 AA.
AC I3V6S3;
DT 05-SEP-2012, integrated into UniProtKB/TrEMBL.
DT 05-SEP-2012, sequence version 1.
DT 27-MAR-2024, entry version 19.
DE SubName: Full=MHC class II antigen {ECO:0000313|EMBL:AFK73875.1};
DE Flags: Fragment;
GN Name=MHC-DQA {ECO:0000313|EMBL:AFK73875.1};
OS Peromyscus californicus (California mouse).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea;
OC Cricetidae; Neotominae; Peromyscus.
OX NCBI_TaxID=42520 {ECO:0000313|EMBL:AFK73875.1};
RN [1] {ECO:0000313|EMBL:AFK73875.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=PECA263 {ECO:0000313|EMBL:AFK73875.1};
RA MacManes M.D.;
RL Submitted (SEP-2011) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:AFK73875.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=PECA263 {ECO:0000313|EMBL:AFK73875.1};
RX PubMed=22649541; DOI=10.1371/journal.pone.0037562;
RA Macmanes M.D., Lacey E.A.;
RT "Is Promiscuity Associated with Enhanced Selection on MHC-DQalpha in Mice
RT (genus Peromyscus)?";
RL PLoS ONE 7:E37562-E37562(2012).
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DR EMBL; JN703346; AFK73875.1; -; Genomic_DNA.
DR AlphaFoldDB; I3V6S3; -.
DR GO; GO:0042613; C:MHC class II protein complex; IEA:InterPro.
DR GO; GO:0019882; P:antigen processing and presentation; IEA:InterPro.
DR GO; GO:0006955; P:immune response; IEA:InterPro.
DR GO; GO:1903037; P:regulation of leukocyte cell-cell adhesion; IEA:UniProt.
DR GO; GO:0050863; P:regulation of T cell activation; IEA:UniProt.
DR InterPro; IPR011162; MHC_I/II-like_Ag-recog.
DR InterPro; IPR014745; MHC_II_a/b_N.
DR InterPro; IPR001003; MHC_II_a_N.
DR PANTHER; PTHR19944:SF59; HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, DQ ALPHA 1 CHAIN; 1.
DR PANTHER; PTHR19944; MHC CLASS II-RELATED; 1.
DR Pfam; PF00993; MHC_II_alpha; 1.
DR SMART; SM00920; MHC_II_alpha; 1.
DR SUPFAM; SSF54452; MHC antigen-recognition domain; 1.
PE 4: Predicted;
KW Glycoprotein {ECO:0000256|ARBA:ARBA00023180}.
FT DOMAIN 3..83
FT /note="MHC class II alpha chain N-terminal"
FT /evidence="ECO:0000259|SMART:SM00920"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:AFK73875.1"
FT NON_TER 85
FT /evidence="ECO:0000313|EMBL:AFK73875.1"
SQ SEQUENCE 85 AA; 9497 MW; 04DC4FF7264A91A0 CRC64;
ADHVGAYGIN VYQSYGSNGQ YTMEFDGDEE FYVDLDKKET VWRIPEFAQL TSFDPQGGLQ
EIATAKHNLD LLTKESNFTP ATNGT
//
