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Database: UniProt
Entry: I3V6U4_PERMA
LinkDB: I3V6U4_PERMA
Original site: I3V6U4_PERMA 
ID   I3V6U4_PERMA            Unreviewed;        85 AA.
AC   I3V6U4;
DT   05-SEP-2012, integrated into UniProtKB/TrEMBL.
DT   05-SEP-2012, sequence version 1.
DT   13-SEP-2023, entry version 18.
DE   SubName: Full=MHC class II antigen {ECO:0000313|EMBL:AFK73896.1};
DE   Flags: Fragment;
GN   Name=MHC-DQA {ECO:0000313|EMBL:AFK73896.1};
OS   Peromyscus maniculatus (North American deer mouse).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea;
OC   Cricetidae; Neotominae; Peromyscus.
OX   NCBI_TaxID=10042 {ECO:0000313|EMBL:AFK73896.1};
RN   [1] {ECO:0000313|EMBL:AFK73896.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=PEMA244a {ECO:0000313|EMBL:AFK73896.1};
RA   MacManes M.D.;
RL   Submitted (SEP-2011) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:AFK73896.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=PEMA244a {ECO:0000313|EMBL:AFK73896.1};
RX   PubMed=22649541; DOI=10.1371/journal.pone.0037562;
RA   Macmanes M.D., Lacey E.A.;
RT   "Is Promiscuity Associated with Enhanced Selection on MHC-DQalpha in Mice
RT   (genus Peromyscus)?";
RL   PLoS ONE 7:E37562-E37562(2012).
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DR   EMBL; JN703367; AFK73896.1; -; Genomic_DNA.
DR   AlphaFoldDB; I3V6U4; -.
DR   GO; GO:0042613; C:MHC class II protein complex; IEA:InterPro.
DR   GO; GO:0019882; P:antigen processing and presentation; IEA:InterPro.
DR   GO; GO:0006955; P:immune response; IEA:InterPro.
DR   InterPro; IPR011162; MHC_I/II-like_Ag-recog.
DR   InterPro; IPR014745; MHC_II_a/b_N.
DR   InterPro; IPR001003; MHC_II_a_N.
DR   PANTHER; PTHR19944:SF59; HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, DQ ALPHA 1 CHAIN; 1.
DR   PANTHER; PTHR19944; MHC CLASS II-RELATED; 1.
DR   Pfam; PF00993; MHC_II_alpha; 1.
DR   SMART; SM00920; MHC_II_alpha; 1.
DR   SUPFAM; SSF54452; MHC antigen-recognition domain; 1.
PE   4: Predicted;
KW   Glycoprotein {ECO:0000256|ARBA:ARBA00023180}.
FT   DOMAIN          3..83
FT                   /note="MHC class II alpha chain N-terminal"
FT                   /evidence="ECO:0000259|SMART:SM00920"
FT   NON_TER         1
FT                   /evidence="ECO:0000313|EMBL:AFK73896.1"
FT   NON_TER         85
FT                   /evidence="ECO:0000313|EMBL:AFK73896.1"
SQ   SEQUENCE   85 AA;  9571 MW;  4CA4DF323A0E3CDC CRC64;
     ADHVGAYGLE VYQSYGPNGQ YTFEFDGDEE FYVDLDKRET VWRIPEFGQL TSFDPQGGLQ
     EIAISKQYLD VVIKRSNSTP ATNGT
//
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