UniProt: I3W2N6

Database: UniProt
Entry: I3W2N6_PSESX

LinkDB:  I3W2N6_PSESX 
Original site:  I3W2N6_PSESX

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Ontology (3)   
   GO (3)   
Gene (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   EMBL (4)   
Protein domain (10)   
   InterPro (6)   
   Pfam (2)   
   PROSITE (2)   
Literature (1)   
   PubMed (1)   
All databases (21)   

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ID   I3W2N6_PSESX            Unreviewed;       340 AA.
AC   I3W2N6;
DT   05-SEP-2012, integrated into UniProtKB/TrEMBL.
DT   05-SEP-2012, sequence version 1.
DT   24-JAN-2024, entry version 46.
DE   SubName: Full=IS21-like element ISPsy4 family transposase {ECO:0000313|EMBL:QBI60474.1};
DE   SubName: Full=ISPsy4, transposase {ECO:0000313|EMBL:AFK89863.1};
GN   ORFNames=EIZ61_02595 {ECO:0000313|EMBL:QBI60474.1}, EIZ61_02855
GN   {ECO:0000313|EMBL:QBI60521.1}, EIZ61_04710
GN   {ECO:0000313|EMBL:QBI60844.1}, EIZ61_05785
GN   {ECO:0000313|EMBL:QBI61024.1}, EIZ61_15030
GN   {ECO:0000313|EMBL:QBI62684.1}, EIZ61_23475
GN   {ECO:0000313|EMBL:QBI64190.1}, EIZ61_24425
GN   {ECO:0000313|EMBL:QBI64358.1}, EIZ61_29010
GN   {ECO:0000313|EMBL:QBI65171.1}, EIZ61_29205
GN   {ECO:0000313|EMBL:QBI65201.1}, EIZ61_31270
GN   {ECO:0000313|EMBL:QBI65876.1}, EIZ61_31570
GN   {ECO:0000313|EMBL:QBI65931.1}, EIZ61_32100
GN   {ECO:0000313|EMBL:QBI66020.1};
OS   Pseudomonas syringae.
OG   Plasmid pPT14-32 {ECO:0000313|EMBL:AFK89863.1},
OG   Plasmid pPs251 {ECO:0000313|EMBL:QBI65876.1},
OG   Plasmid pPs253 {ECO:0000313|EMBL:QBI65931.1},
OG   Plasmid pps251 {ECO:0000313|Proteomes:UP000291230}, and
OG   Plasmid pps253 {ECO:0000313|Proteomes:UP000291230}.
OC   Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
OC   Pseudomonadaceae; Pseudomonas.
OX   NCBI_TaxID=317 {ECO:0000313|EMBL:AFK89863.1};
RN   [1] {ECO:0000313|EMBL:AFK89863.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=PT14 {ECO:0000313|EMBL:AFK89863.1};
RC   PLASMID=pPT14-32 {ECO:0000313|EMBL:AFK89863.1};
RA   Summers A.O., Wireman J.;
RL   Submitted (JAN-2012) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:QBI60474.1, ECO:0000313|Proteomes:UP000291230}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Ps25 {ECO:0000313|EMBL:QBI60474.1,
RC   ECO:0000313|Proteomes:UP000291230};
RC   PLASMID=pPs251 {ECO:0000313|EMBL:QBI65876.1}, and pPs253
RC   {ECO:0000313|EMBL:QBI65931.1};
RX   PubMed=30785360;
RA   Mazo-Molina C., Mainiero S., Hind S.R., Kraus C.M., Vachev M.,
RA   Maviane-Macia F., Lindeberg M., Saha S., Strickler S., Feder A.,
RA   Giovannoni J., Smart C., Peeters N., Martin G.;
RT   "The Ptr1 locus of Solanum lycopersicoides confers resistance to race 1
RT   strains of Pseudomonas syringae pv. tomato and to Ralstonia
RT   pseudosolanacearum by recognizing the type III effectors AvrRpt2/RipBN.";
RL   Mol. Plant Microbe Interact. 0:0-0(2019).
CC   -!- SIMILARITY: Belongs to the transposase IS21/IS408/IS1162 family.
CC       {ECO:0000256|ARBA:ARBA00009277}.
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DR   EMBL; JQ418536; AFK89863.1; -; Genomic_DNA.
DR   EMBL; CP034558; QBI60474.1; -; Genomic_DNA.
DR   EMBL; CP034558; QBI60521.1; -; Genomic_DNA.
DR   EMBL; CP034558; QBI60844.1; -; Genomic_DNA.
DR   EMBL; CP034558; QBI61024.1; -; Genomic_DNA.
DR   EMBL; CP034558; QBI62684.1; -; Genomic_DNA.
DR   EMBL; CP034558; QBI64190.1; -; Genomic_DNA.
DR   EMBL; CP034558; QBI64358.1; -; Genomic_DNA.
DR   EMBL; CP034558; QBI65171.1; -; Genomic_DNA.
DR   EMBL; CP034558; QBI65201.1; -; Genomic_DNA.
DR   EMBL; CP034560; QBI65876.1; -; Genomic_DNA.
DR   EMBL; CP034561; QBI65931.1; -; Genomic_DNA.
DR   EMBL; CP034561; QBI66020.1; -; Genomic_DNA.
DR   RefSeq; WP_002551322.1; NZ_LT985194.1.
DR   RefSeq; YP_006963710.1; NC_019334.1.
DR   AlphaFoldDB; I3W2N6; -.
DR   GeneID; 1187418; -.
DR   Proteomes; UP000291230; Chromosome.
DR   Proteomes; UP000291230; Plasmid pps251.
DR   Proteomes; UP000291230; Plasmid pps253.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0000150; F:DNA strand exchange activity; IEA:InterPro.
DR   GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR   Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR   Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR017894; HTH_IS21_transposase_type.
DR   InterPro; IPR001584; Integrase_cat-core.
DR   InterPro; IPR006120; Resolvase_HTH_dom.
DR   InterPro; IPR012337; RNaseH-like_sf.
DR   InterPro; IPR036397; RNaseH_sf.
DR   NCBIfam; NF033546; transpos_IS21; 1.
DR   PANTHER; PTHR35004; TRANSPOSASE RV3428C-RELATED; 1.
DR   PANTHER; PTHR35004:SF6; TRANSPOSASE RV3428C-RELATED; 1.
DR   Pfam; PF02796; HTH_7; 1.
DR   Pfam; PF00665; rve; 1.
DR   SUPFAM; SSF46689; Homeodomain-like; 1.
DR   SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR   PROSITE; PS50531; HTH_IS21; 1.
DR   PROSITE; PS50994; INTEGRASE; 1.
PE   3: Inferred from homology;
KW   Plasmid {ECO:0000313|EMBL:AFK89863.1}.
FT   DOMAIN          5..68
FT                   /note="HTH IS21-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50531"
FT   DOMAIN          115..295
FT                   /note="Integrase catalytic"
FT                   /evidence="ECO:0000259|PROSITE:PS50994"
SQ   SEQUENCE   340 AA;  38347 MW;  2A7628FAA1136319 CRC64;
     MLTQEQSVEI KVLARQGHGI KFIARELGIS RNTVRKYLRK ARSLPSDKVR PARPCKIDPF
     KDYLHERIEA ARPHWIPATV LLREITALGY SGGVSRLKAY IRPFKRKAEE PVVRFETLPG
     KQIQVDFTTI RRGRQPLKAF VATLGFSRAS FVRFSEREDS EAWLTGLREA FAYFGGVPEQ
     ALFDNAGTII TERDAFGEGQ HRWHPRLAAL ADEFGFIPKV CRPYRAQTKG KVERFNGYLK
     GSFITPLAAT LKSAGLTLDV VTANAHIGQW LDEVAHQRIH GTTGVQPAVR LAQEQQVLLP
     LPTQSLRPQP AQGLRLGRVL PYESLQHPLS VYEQLLEVRA
//

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