ID I3WJS4_BIFBI Unreviewed; 861 AA.
AC I3WJS4;
DT 05-SEP-2012, integrated into UniProtKB/TrEMBL.
DT 05-SEP-2012, sequence version 1.
DT 27-MAR-2024, entry version 58.
DE SubName: Full=Glycogen debranching enzyme {ECO:0000313|EMBL:AFL05137.1};
GN Name=glgX {ECO:0000313|EMBL:AFL05137.1};
GN ORFNames=BBB_1546 {ECO:0000313|EMBL:AFL05137.1};
OS Bifidobacterium bifidum BGN4.
OC Bacteria; Actinomycetota; Actinomycetes; Bifidobacteriales;
OC Bifidobacteriaceae; Bifidobacterium.
OX NCBI_TaxID=484020 {ECO:0000313|EMBL:AFL05137.1, ECO:0000313|Proteomes:UP000006173};
RN [1] {ECO:0000313|EMBL:AFL05137.1, ECO:0000313|Proteomes:UP000006173}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BGN4 {ECO:0000313|EMBL:AFL05137.1,
RC ECO:0000313|Proteomes:UP000006173};
RX PubMed=22887663; DOI=10.1128/JB.00988-12;
RA Yu D.S., Jeong H., Lee D.H., Kwon S.K., Song J.Y., Kim B.K., Park M.S.,
RA Ji G.E., Oh T.K., Kim J.F.;
RT "Complete Genome Sequence of the Probiotic Bacterium Bifidobacterium
RT bifidum Strain BGN4.";
RL J. Bacteriol. 194:4757-4758(2012).
CC -!- SIMILARITY: Belongs to the glycosyl hydrolase 13 family.
CC {ECO:0000256|ARBA:ARBA00008061}.
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DR EMBL; CP001361; AFL05137.1; -; Genomic_DNA.
DR RefSeq; WP_014760621.1; NC_017999.1.
DR AlphaFoldDB; I3WJS4; -.
DR KEGG; bbf:BBB_1546; -.
DR PATRIC; fig|484020.3.peg.1531; -.
DR HOGENOM; CLU_011725_4_1_11; -.
DR Proteomes; UP000006173; Chromosome.
DR GO; GO:0004133; F:glycogen debranching enzyme activity; IEA:InterPro.
DR GO; GO:0004553; F:hydrolase activity, hydrolyzing O-glycosyl compounds; IEA:InterPro.
DR GO; GO:0005980; P:glycogen catabolic process; IEA:InterPro.
DR CDD; cd11326; AmyAc_Glg_debranch; 1.
DR CDD; cd02856; E_set_GDE_Isoamylase_N; 1.
DR Gene3D; 3.20.20.80; Glycosidases; 1.
DR Gene3D; 2.60.40.1180; Golgi alpha-mannosidase II; 1.
DR Gene3D; 2.60.40.10; Immunoglobulins; 1.
DR InterPro; IPR044505; GlgX_Isoamylase_N_E_set.
DR InterPro; IPR006047; Glyco_hydro_13_cat_dom.
DR InterPro; IPR013780; Glyco_hydro_b.
DR InterPro; IPR011837; Glycogen_debranch_GlgX.
DR InterPro; IPR017853; Glycoside_hydrolase_SF.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR014756; Ig_E-set.
DR NCBIfam; TIGR02100; glgX_debranch; 1.
DR PANTHER; PTHR43002; GLYCOGEN DEBRANCHING ENZYME; 1.
DR PANTHER; PTHR43002:SF1; ISOAMYLASE 1, CHLOROPLASTIC; 1.
DR Pfam; PF00128; Alpha-amylase; 1.
DR SMART; SM00642; Aamy; 1.
DR SUPFAM; SSF51445; (Trans)glycosidases; 1.
DR SUPFAM; SSF81296; E set domains; 1.
DR SUPFAM; SSF51011; Glycosyl hydrolase domain; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000006173}.
FT DOMAIN 219..646
FT /note="Glycosyl hydrolase family 13 catalytic"
FT /evidence="ECO:0000259|SMART:SM00642"
SQ SEQUENCE 861 AA; 96552 MW; 587FE77C3DB1FB56 CRC64;
MKHAIPQRYA IPHRYATRPG LYFTEDGGAD VIVRSETADQ VWLCIYEKVD QPTAFFNDAI
RIFDDSATPF INEIHEHAVC TRIIEPMYVR ETLFRMDGPN YGLWYVHLPK AWDGMRYAYR
VDGAWDPSKG LRFNPYKLLL DPYGKGIDGR MKLSPAAFSY QCDVSEDGKV RGSAFGPMST
VDALGNMPVS VAIDDRDKTK HDADPSHPHV PWSKTVLYEL HIKGFTANAP WLPKELRGTY
AGLAHPTTLS YLQSLGVTSI ELLPIQAKQD ELFLQERGRH NYWGYSPLSY FSPEPSYATA
EAQRKGARAI RDEVIGMVRA LHEAGFEVIM DVVYNHTCEG GVEGPTTCWR GLDALLYYRR
QKGNIGRLED TTGCGNTFDF TNTHVVTFAV DSLRYWAKRI GIDGFRFDLG VSLARLDGDF
TKHHPFLYAL RSDLLLGNLK LIMEPWDLGP QGWRTGGFGM PFSEWNDRFR DTVRRFWITD
TQPGAPSGIG MQEMATRLCG SSDLFATEPG RGCVSSINYV SCHDGFTLTD LTRYAVKHNE
ANGENNIDGS NVNHSANFGV EGPSDDPAII RKREQAAMNM LGTLMLSLGT PMMLAGDEFG
NSQSGNNNAY AQDNDITWLN WDWMYQTRKT MQMHRLDTVS RLLSIRKSLG LYHHEEFFTR
LTQLGLFKPS SRVQWYLPDG TTPMDRDWFD TTIRSFAMRL LSQDEVDVLI VINGVDEVRR
FTLPSDCSWQ CDWSSATAVG LRPAPGDRLQ RIGKNQALRS NWTMSVSEKD NIHQLLKTIQ
ASLAEQDKLD LFGATTEHAD VLFEDDEQAP GVGADVSATM SAASTVHGAS ASARDDGDAT
VNGSAVWTMP ALSISVMRRL Q
//
