ID I3ZIC8_TERRK Unreviewed; 521 AA.
AC I3ZIC8;
DT 05-SEP-2012, integrated into UniProtKB/TrEMBL.
DT 05-SEP-2012, sequence version 1.
DT 27-MAR-2024, entry version 52.
DE SubName: Full=DNA-directed RNA polymerase specialized sigma subunit, sigma24 {ECO:0000313|EMBL:AFL88996.1};
GN OrderedLocusNames=Terro_2760 {ECO:0000313|EMBL:AFL88996.1};
OS Terriglobus roseus (strain DSM 18391 / NRRL B-41598 / KBS 63).
OC Bacteria; Acidobacteriota; Terriglobia; Terriglobales; Acidobacteriaceae;
OC Terriglobus.
OX NCBI_TaxID=926566 {ECO:0000313|EMBL:AFL88996.1, ECO:0000313|Proteomes:UP000006056};
RN [1] {ECO:0000313|EMBL:AFL88996.1, ECO:0000313|Proteomes:UP000006056}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 18391 / NRRL B-41598 / KBS 63
RC {ECO:0000313|Proteomes:UP000006056};
RG US DOE Joint Genome Institute (JGI-PGF);
RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H.,
RA Bruce D., Goodwin L., Pitluck S., Peters L., Mikhailova N., Munk A.C.C.,
RA Kyrpides N., Mavromatis K., Ivanova N., Brettin T., Detter J.C., Han C.,
RA Larimer F., Land M., Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P.,
RA Woyke T., Wu D., Brambilla E., Klenk H.-P., Eisen J.A.;
RT "Complete genome of Terriglobus roseus DSM 18391.";
RL Submitted (JUN-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the sigma-54 factor family.
CC {ECO:0000256|ARBA:ARBA00008798}.
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DR EMBL; CP003379; AFL88996.1; -; Genomic_DNA.
DR RefSeq; WP_014786260.1; NC_018014.1.
DR AlphaFoldDB; I3ZIC8; -.
DR STRING; 926566.Terro_2760; -.
DR KEGG; trs:Terro_2760; -.
DR PATRIC; fig|926566.3.peg.2745; -.
DR eggNOG; COG1508; Bacteria.
DR HOGENOM; CLU_020569_0_1_0; -.
DR OrthoDB; 9814402at2; -.
DR Proteomes; UP000006056; Chromosome.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0001216; F:DNA-binding transcription activator activity; IEA:InterPro.
DR GO; GO:0016779; F:nucleotidyltransferase activity; IEA:UniProtKB-KW.
DR GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 1.10.10.1330; RNA polymerase sigma-54 factor, core-binding domain; 1.
DR InterPro; IPR000394; RNA_pol_sigma_54.
DR InterPro; IPR007046; RNA_pol_sigma_54_core-bd.
DR InterPro; IPR007634; RNA_pol_sigma_54_DNA-bd.
DR InterPro; IPR038709; RpoN_core-bd_sf.
DR PANTHER; PTHR32248; RNA POLYMERASE SIGMA-54 FACTOR; 1.
DR PANTHER; PTHR32248:SF4; RNA POLYMERASE SIGMA-54 FACTOR; 1.
DR Pfam; PF00309; Sigma54_AID; 1.
DR Pfam; PF04963; Sigma54_CBD; 1.
DR Pfam; PF04552; Sigma54_DBD; 1.
DR PIRSF; PIRSF000774; RpoN; 1.
DR PROSITE; PS00717; SIGMA54_1; 1.
DR PROSITE; PS00718; SIGMA54_2; 1.
DR PROSITE; PS50044; SIGMA54_3; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW DNA-directed RNA polymerase {ECO:0000256|ARBA:ARBA00022478,
KW ECO:0000313|EMBL:AFL88996.1};
KW Nucleotidyltransferase {ECO:0000256|ARBA:ARBA00022695};
KW Reference proteome {ECO:0000313|Proteomes:UP000006056};
KW Sigma factor {ECO:0000256|ARBA:ARBA00023082};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015};
KW Transferase {ECO:0000256|ARBA:ARBA00022679}.
FT DOMAIN 120..346
FT /note="RNA polymerase sigma factor 54 core-binding"
FT /evidence="ECO:0000259|Pfam:PF04963"
FT DOMAIN 361..519
FT /note="RNA polymerase sigma factor 54 DNA-binding"
FT /evidence="ECO:0000259|Pfam:PF04552"
FT REGION 58..87
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 521 AA; 59344 MW; 06F97B26FBBF8025 CRC64;
MLLQPKLNLR VSQRQVLTPG LVQMVSVLAL NKLELKEMIN AEVVENPVLE EIEENAQTYE
EQAGREGDRE LSAEQQQTET ERVEKDPFDE IDMGEYFQEY LDPGFRVAGP SFEDVDAPSF
ENFLSKPSTL SDHLMWQIGS MSLRPELRAA TEVIIGNLEE NGYLLVSDEE LASHDTRGIA
TPELLAEARA VIQSLDPTGV GAADLRECLL LQVQAGLREV EAAIVRARRH TLQTGEDESA
QDLSPLPALE ARRVQLKLAC RIIVDHLLLL QKRDLRELMR LLASHADAVT SAIECIRQLD
PRPGLRYNVS ETRLIEPDVA FVKRGDDWTV VMNEEDLPAL RLNSGYRKMM RQKETEREVK
EYVKERYRSA IQLLRNIEQR KNTIVRTCEC IVRRQGDFLE RGVDAMRPMM IKEVAEEIGV
HPSTVSRAVA NKYVHTPQGV YELRFFFAEG VNGPEGGDLP LPLLKKKVRK LIDDEDPRKP
LTDDALAAEL QRQGIQVTRR TVAKYREDMN IPSTHQRRQR Q
//
