ID I4MF15_GARVA Unreviewed; 182 AA.
AC I4MF15;
DT 05-SEP-2012, integrated into UniProtKB/TrEMBL.
DT 05-SEP-2012, sequence version 1.
DT 24-JAN-2024, entry version 44.
DE RecName: Full=UPF0102 protein CGSMWGv6119V5_01403 {ECO:0000256|HAMAP-Rule:MF_00048};
GN ORFNames=CGSMWGv6119V5_01403 {ECO:0000313|EMBL:EIK87805.1};
OS Gardnerella vaginalis 6119V5.
OC Bacteria; Actinomycetota; Actinomycetes; Bifidobacteriales;
OC Bifidobacteriaceae; Gardnerella.
OX NCBI_TaxID=698961 {ECO:0000313|EMBL:EIK87805.1, ECO:0000313|Proteomes:UP000033041};
RN [1] {ECO:0000313|EMBL:EIK87805.1, ECO:0000313|Proteomes:UP000033041}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=6119V5 {ECO:0000313|EMBL:EIK87805.1,
RC ECO:0000313|Proteomes:UP000033041};
RX PubMed=22609915; DOI=10.1128/JB.00056-12;
RA Ahmed A., Earl J., Retchless A., Hillier S., Rabe L., Cherpes T.,
RA Powell E., Janto B., Eutsey R., Hiller N.L., Boissy R., Dahlgreen M.,
RA Hall B., Costerton J., Post J.C., Hu F., Ehrlich G.;
RT "Comparative Genomic Analyses of 17 Clinical Isolates of Gardnerella
RT vaginalis Provide Evidence of Multiple Genetically Isolated Clades
RT Consistent with Subspeciation into Genovars.";
RL J. Bacteriol. 194:3922-3937(2012).
CC -!- SIMILARITY: Belongs to the UPF0102 family.
CC {ECO:0000256|ARBA:ARBA00006738, ECO:0000256|HAMAP-Rule:MF_00048}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EIK87805.1}.
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DR EMBL; ADEW01000003; EIK87805.1; -; Genomic_DNA.
DR RefSeq; WP_004136011.1; NZ_ADEW01000003.1.
DR AlphaFoldDB; I4MF15; -.
DR PATRIC; fig|698961.3.peg.277; -.
DR eggNOG; COG0792; Bacteria.
DR OrthoDB; 9794876at2; -.
DR Proteomes; UP000033041; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR CDD; cd20736; PoNe_Nuclease; 1.
DR Gene3D; 3.40.1350.10; -; 1.
DR HAMAP; MF_00048; UPF0102; 1.
DR InterPro; IPR011335; Restrct_endonuc-II-like.
DR InterPro; IPR011856; tRNA_endonuc-like_dom_sf.
DR InterPro; IPR003509; UPF0102_YraN-like.
DR PANTHER; PTHR34039; UPF0102 PROTEIN YRAN; 1.
DR PANTHER; PTHR34039:SF1; UPF0102 PROTEIN YRAN; 1.
DR Pfam; PF02021; UPF0102; 1.
DR SUPFAM; SSF52980; Restriction endonuclease-like; 1.
PE 3: Inferred from homology;
SQ SEQUENCE 182 AA; 21107 MW; 0BF8ADAE35FB4F3E CRC64;
MITQKHIIDD EIISFDEIDD AETAQVFLQE KLEQVSNELQ SYSVDSKELG KLGETYAALR
LMQQGWHVID RNWHSRQGEL DLVMITPEQK LVFVEVKTRR SVRCGTPLEA INQDKRNKLR
KAGMQWIEKF GTDIPRYRIR FDAVSILVIN KYTYSDSACM IQALEEINNN SNIQFTHIPG
AF
//
