ID I4MY88_9PSED Unreviewed; 201 AA.
AC I4MY88;
DT 05-SEP-2012, integrated into UniProtKB/TrEMBL.
DT 05-SEP-2012, sequence version 1.
DT 24-JAN-2024, entry version 31.
DE SubName: Full=Helix-hairpin-helix DNA-binding motif-containing protein {ECO:0000313|EMBL:EIK94178.1};
GN ORFNames=PMM47T1_23232 {ECO:0000313|EMBL:EIK94178.1};
OS Pseudomonas sp. M47T1.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
OC Pseudomonadaceae; Pseudomonas.
OX NCBI_TaxID=1179778 {ECO:0000313|EMBL:EIK94178.1, ECO:0000313|Proteomes:UP000004339};
RN [1] {ECO:0000313|EMBL:EIK94178.1, ECO:0000313|Proteomes:UP000004339}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=M47T1 {ECO:0000313|EMBL:EIK94178.1,
RC ECO:0000313|Proteomes:UP000004339};
RX PubMed=22887683; DOI=10.1128/JB.01116-12;
RA Proenca D.N., Espirito Santo C., Grass G., Morais P.V.;
RT "Draft Genome Sequence of Pseudomonas sp. Strain M47T1, Carried by
RT Bursaphelenchus xylophilus Isolated from Pinus pinaster.";
RL J. Bacteriol. 194:4789-4790(2012).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EIK94178.1}.
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DR EMBL; AJWX01000027; EIK94178.1; -; Genomic_DNA.
DR RefSeq; WP_008373604.1; NZ_AJWX01000027.1.
DR AlphaFoldDB; I4MY88; -.
DR STRING; 1179778.PMM47T1_23232; -.
DR PATRIC; fig|1179778.3.peg.4629; -.
DR eggNOG; COG1396; Bacteria.
DR OrthoDB; 9805356at2; -.
DR Proteomes; UP000004339; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR CDD; cd02209; cupin_XRE_C; 1.
DR CDD; cd00093; HTH_XRE; 1.
DR Gene3D; 2.60.120.10; Jelly Rolls; 1.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR001387; Cro/C1-type_HTH.
DR InterPro; IPR013096; Cupin_2.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR InterPro; IPR014710; RmlC-like_jellyroll.
DR InterPro; IPR011051; RmlC_Cupin_sf.
DR PANTHER; PTHR46797:SF19; BLR5530 PROTEIN; 1.
DR PANTHER; PTHR46797; HTH-TYPE TRANSCRIPTIONAL REGULATOR; 1.
DR Pfam; PF07883; Cupin_2; 1.
DR Pfam; PF01381; HTH_3; 1.
DR SMART; SM00530; HTH_XRE; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR SUPFAM; SSF51182; RmlC-like cupins; 1.
DR PROSITE; PS50943; HTH_CROC1; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000313|EMBL:EIK94178.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000004339}.
FT DOMAIN 21..75
FT /note="HTH cro/C1-type"
FT /evidence="ECO:0000259|PROSITE:PS50943"
SQ SEQUENCE 201 AA; 22609 MW; 2B90212C421775D8 CRC64;
MNMPIDPQPR LKLEQYLGMQ IKRQRQAQEL KLADVARIAG ISQGMLSKIE NAQVSTSLDT
LSRLCDVLGM PMSKLFSQYD QQGSSALLVK ADEGLEVVRR GTEKGHTYHL LNHTRGPKKS
FEAYMVSMDD ASEEFPTFSH PGTEFLHLLE GELIYRHGNQ LYRMEAGDSL TFDGEIPHGP
EQLVQVPIKL LSIMNYGTES Q
//