ID I5CLW6_9BURK Unreviewed; 491 AA.
AC I5CLW6;
DT 05-SEP-2012, integrated into UniProtKB/TrEMBL.
DT 05-SEP-2012, sequence version 1.
DT 24-JAN-2024, entry version 29.
DE RecName: Full=Type-4 uracil-DNA glycosylase {ECO:0000256|ARBA:ARBA00019403};
GN ORFNames=WQE_31561 {ECO:0000313|EMBL:EIM96884.1};
OS Paraburkholderia hospita BS001.
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Burkholderiaceae; Paraburkholderia.
OX NCBI_TaxID=1171375 {ECO:0000313|EMBL:EIM96884.1};
RN [1] {ECO:0000313|EMBL:EIM96884.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BS001 {ECO:0000313|EMBL:EIM96884.1};
RX PubMed=22843604; DOI=10.1128/JB.00725-12;
RA Nazir R., Hansen M.A., Sorensen S., van Elsas J.D.;
RT "Draft Genome Sequence of the Soil Bacterium Burkholderia terrae Strain
RT BS001, Which Interacts with Fungal Surface Structures.";
RL J. Bacteriol. 194:4480-4481(2012).
CC -!- SIMILARITY: Belongs to the uracil-DNA glycosylase (UDG) superfamily.
CC Type 4 (UDGa) family. {ECO:0000256|ARBA:ARBA00006521}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EIM96884.1}.
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DR EMBL; AKAU01000176; EIM96884.1; -; Genomic_DNA.
DR AlphaFoldDB; I5CLW6; -.
DR PATRIC; fig|1171375.3.peg.6537; -.
DR GO; GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0004844; F:uracil DNA N-glycosylase activity; IEA:UniProtKB-EC.
DR CDD; cd10030; UDG-F4_TTUDGA_SPO1dp_like; 1.
DR Gene3D; 3.40.470.10; Uracil-DNA glycosylase-like domain; 1.
DR InterPro; IPR023875; DNA_repair_put.
DR InterPro; IPR025404; DUF4130.
DR InterPro; IPR005273; Ura-DNA_glyco_family4.
DR InterPro; IPR005122; Uracil-DNA_glycosylase-like.
DR InterPro; IPR036895; Uracil-DNA_glycosylase-like_sf.
DR NCBIfam; TIGR03915; SAM_7_link_chp; 1.
DR NCBIfam; TIGR00758; UDG_fam4; 1.
DR NCBIfam; TIGR03914; UDG_fam_dom; 1.
DR PANTHER; PTHR33693; TYPE-5 URACIL-DNA GLYCOSYLASE; 1.
DR PANTHER; PTHR33693:SF3; TYPE-5 URACIL-DNA GLYCOSYLASE; 1.
DR Pfam; PF13566; DUF4130; 1.
DR Pfam; PF03167; UDG; 1.
DR SMART; SM00986; UDG; 1.
DR SMART; SM00987; UreE_C; 1.
DR SUPFAM; SSF52141; Uracil-DNA glycosylase-like; 1.
PE 3: Inferred from homology;
KW 4Fe-4S {ECO:0000256|ARBA:ARBA00022485};
KW Iron {ECO:0000256|ARBA:ARBA00023004};
KW Iron-sulfur {ECO:0000256|ARBA:ARBA00023014};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723}.
FT DOMAIN 315..470
FT /note="Uracil-DNA glycosylase-like"
FT /evidence="ECO:0000259|SMART:SM00986"
SQ SEQUENCE 491 AA; 55154 MW; 58728A7ED9DA9B4C CRC64;
MRVISIDDSY AAWREAALQA LASRIAPEDI DWRVIGDDDR ATTPALFDDH ASASQATTAP
ANVRISRELG ELLKDAALYR DTARWAFLYR VLWRWHDGDR SVASAADCDG ARLYKMAKAV
RRAKHDMIAY VRFRLREPGN DAPAADLPEY VAWYEPEHDV LAWSAEHFAR RMGRSTWLIS
TPDSAAWWNG SALRLERRPA LSSDHCRHTA DEAEALWLAY YRSTFNPARL NETALEQHMP
VRFWKGLPEG HLIPSMISEA KSGAQRVAQA RGVGVLGGKS VPVDAHSAQP ARQPPSTLDA
CRRCELWRHA TQAVDGIGPD DARIMLIGEQ PGDQEDLAGK PFVGPAGRLL DVAIERAGLR
REHLYLTNAV KHFKWTLRGK RRLHKTAAQQ EIDACGYWLE RELERVKPAV VVTLGATALT
ALLHEKVNLR DWIERSIDVD GMQVISTYHP SFALRQENDE ARERVLDAIA SALARARDLA
DTGQERRHVS R
//