ID I6ZKU6_ENCRO Unreviewed; 225 AA.
AC I6ZKU6;
DT 03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 03-OCT-2012, sequence version 1.
DT 27-MAR-2024, entry version 39.
DE SubName: Full=Rrp4-like RNA-binding protein {ECO:0000313|EMBL:AFN83938.1};
GN OrderedLocusNames=EROM_101230 {ECO:0000313|EMBL:AFN83938.1};
OS Encephalitozoon romaleae (strain SJ-2008) (Microsporidian parasite).
OC Eukaryota; Fungi; Fungi incertae sedis; Microsporidia; Unikaryonidae;
OC Encephalitozoon.
OX NCBI_TaxID=1178016 {ECO:0000313|EMBL:AFN83938.1, ECO:0000313|Proteomes:UP000010094};
RN [1] {ECO:0000313|EMBL:AFN83938.1, ECO:0000313|Proteomes:UP000010094}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SJ-2008 {ECO:0000313|EMBL:AFN83938.1,
RC ECO:0000313|Proteomes:UP000010094};
RX PubMed=22802648; DOI=10.1073/pnas.1205020109;
RA Pombert J.-F., Selman M., Burki F., Bardell F.T., Farinelli L.,
RA Solter L.F., Whitman D.W., Weiss L.M., Corradi N., Keeling P.J.;
RT "Gain and loss of multiple functionally related, horizontally transferred
RT genes in the reduced genomes of two microsporidian parasites.";
RL Proc. Natl. Acad. Sci. U.S.A. 109:12638-12643(2012).
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DR EMBL; CP003529; AFN83938.1; -; Genomic_DNA.
DR RefSeq; XP_009265435.1; XM_009267160.1.
DR AlphaFoldDB; I6ZKU6; -.
DR GeneID; 20564553; -.
DR KEGG; ero:EROM_101230; -.
DR VEuPathDB; MicrosporidiaDB:EROM_101230; -.
DR HOGENOM; CLU_034114_1_0_1; -.
DR OrthoDB; 5472588at2759; -.
DR Proteomes; UP000010094; Chromosome X.
DR GO; GO:0000178; C:exosome (RNase complex); IEA:UniProtKB-KW.
DR GO; GO:0005634; C:nucleus; IEA:UniProt.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR CDD; cd05789; S1_Rrp4; 1.
DR Gene3D; 2.40.50.100; -; 1.
DR Gene3D; 2.40.50.140; Nucleic acid-binding proteins; 1.
DR InterPro; IPR025721; Exosome_cplx_N_dom.
DR InterPro; IPR026699; Exosome_RNA_bind1/RRP40/RRP4.
DR InterPro; IPR036612; KH_dom_type_1_sf.
DR InterPro; IPR012340; NA-bd_OB-fold.
DR InterPro; IPR048565; RRP4_S1.
DR PANTHER; PTHR21321:SF4; EXOSOME COMPLEX COMPONENT RRP4; 1.
DR PANTHER; PTHR21321; PNAS-3 RELATED; 1.
DR Pfam; PF14382; ECR1_N; 1.
DR Pfam; PF21266; RRP4_S1; 1.
DR SUPFAM; SSF54791; Eukaryotic type KH-domain (KH-domain type I); 1.
DR SUPFAM; SSF50249; Nucleic acid-binding proteins; 1.
DR SUPFAM; SSF110324; Ribosomal L27 protein-like; 1.
PE 4: Predicted;
KW Exosome {ECO:0000256|ARBA:ARBA00022835};
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884};
KW rRNA processing {ECO:0000256|ARBA:ARBA00022552}.
FT DOMAIN 5..41
FT /note="Exosome complex component N-terminal"
FT /evidence="ECO:0000259|Pfam:PF14382"
FT DOMAIN 54..126
FT /note="RRP4 S1"
FT /evidence="ECO:0000259|Pfam:PF21266"
SQ SEQUENCE 225 AA; 25422 MW; C026F543736F1A18 CRC64;
MKALFLPGEE VLESDGYIRG HGTQLKDSHI VSTYFGKVRI TNKLVAIDPV FPMKYTPEVG
NVVIGRVVGI HNKKWKIDLN SRSDVYLGLS AINLPGAVQR RKQESDEMSM RSFFDINDLV
VSEIQKVNRN GTAALHTRND RYGKLSKGLL VFVPHFLLEP LKTRFLFNDS IKVIAGCNGY
IWIGRRHEDP AEFVEVAKVV SKVKEMASQN RSINMEKILG KEAQH
//
