ID I7JW45_9VIBR Unreviewed; 296 AA.
AC I7JW45;
DT 03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 03-OCT-2012, sequence version 1.
DT 03-MAY-2023, entry version 26.
DE SubName: Full=RNA polymerase sigma factor {ECO:0000313|EMBL:CCI09943.1};
DE Flags: Fragment;
GN Name=rpoD {ECO:0000313|EMBL:CCI09943.1};
OS Vibrio toranzoniae.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC Vibrio.
OX NCBI_TaxID=1194427 {ECO:0000313|EMBL:CCI09943.1};
RN [1] {ECO:0000313|EMBL:CCI09943.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Type strain: Vb 10.8 {ECO:0000313|EMBL:CCI09943.1};
RA Romalde J.;
RL Submitted (MAY-2012) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:CCI09943.1}
RP NUCLEOTIDE SEQUENCE.
RX PubMed=23280322; DOI=10.1016/j.syapm.2012.11.005;
RA Lasa A., Dieguez A.L., Romalde J.L.;
RT "Vibrio toranzoniae sp. nov., a new member of the Splendidus clade in the
RT genus Vibrio.";
RL Syst. Appl. Microbiol. 36:96-100(2013).
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DR EMBL; HE820035; CCI09943.1; -; Genomic_DNA.
DR AlphaFoldDB; I7JW45; -.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0016987; F:sigma factor activity; IEA:InterPro.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR Gene3D; 1.10.601.10; RNA Polymerase Primary Sigma Factor; 1.
DR InterPro; IPR009042; RNA_pol_sigma70_r1_2.
DR InterPro; IPR007631; RNA_pol_sigma_70_non-ess.
DR InterPro; IPR013325; RNA_pol_sigma_r2.
DR Pfam; PF04546; Sigma70_ner; 1.
DR Pfam; PF00140; Sigma70_r1_2; 1.
DR SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
PE 4: Predicted;
FT DOMAIN 5..34
FT /note="RNA polymerase sigma-70 region 1.2"
FT /evidence="ECO:0000259|Pfam:PF00140"
FT DOMAIN 45..255
FT /note="RNA polymerase sigma factor 70 non-essential"
FT /evidence="ECO:0000259|Pfam:PF04546"
FT REGION 76..122
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 98..120
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:CCI09943.1"
FT NON_TER 296
FT /evidence="ECO:0000313|EMBL:CCI09943.1"
SQ SEQUENCE 296 AA; 34062 MW; 2E192EEC4017CAA4 CRC64;
TTVTPVRMYM SEMGNVELLT REGEIDIAKR IEDGINTVQL SVAEYPGTIP YILEQFDRVQ
AEEIRLTDLI NGFVDPDDDG TAAPTATHIG SELAKTDLED EDKEDAEDDE EEEEEDTGID
PELALEKFTA LRTSYQNRQL AINEYGHESP KATLATTMMQ DVFKEFRLTP KQFDYLVNEL
RTSMDRVRTQ ERLIMRQTVE YGKMPKKSFI ALFTGNESSE AWLDEVLASD KPYAEKIKRN
EHDIRRSIQK LDMIERETSL TVQSIKDISR RMSIGEAKAR RAKKEMVEAN LRQVYF
//
