ID I8XJ62_9BACE Unreviewed; 662 AA.
AC I8XJ62;
DT 03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 03-OCT-2012, sequence version 1.
DT 24-JAN-2024, entry version 40.
DE RecName: Full=Glycosyl hydrolase family 88 {ECO:0008006|Google:ProtNLM};
GN ORFNames=HMPREF1068_02686 {ECO:0000313|EMBL:EIY50127.1};
OS Bacteroides nordii CL02T12C05.
OC Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae;
OC Bacteroides.
OX NCBI_TaxID=997884 {ECO:0000313|EMBL:EIY50127.1, ECO:0000313|Proteomes:UP000003089};
RN [1] {ECO:0000313|EMBL:EIY50127.1, ECO:0000313|Proteomes:UP000003089}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CL02T12C05 {ECO:0000313|EMBL:EIY50127.1,
RC ECO:0000313|Proteomes:UP000003089};
RG The Broad Institute Genome Sequencing Platform;
RA Earl A., Ward D., Feldgarden M., Gevers D., Zitomersky N.L., Coyne M.J.,
RA Comstock L.E., Young S.K., Zeng Q., Gargeya S., Fitzgerald M., Haas B.,
RA Abouelleil A., Alvarado L., Arachchi H.M., Berlin A., Chapman S.B.,
RA Gearin G., Goldberg J., Griggs A., Gujja S., Hansen M., Heiman D.,
RA Howarth C., Larimer J., Lui A., MacDonald P.J.P., McCowen C.,
RA Montmayeur A., Murphy C., Neiman D., Pearson M., Priest M., Roberts A.,
RA Saif S., Shea T., Sisk P., Stolte C., Sykes S., Wortman J., Nusbaum C.,
RA Birren B.;
RT "The Genome Sequence of Bacteroides nordii CL02T12C05.";
RL Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EIY50127.1}.
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DR EMBL; AGXS01000016; EIY50127.1; -; Genomic_DNA.
DR RefSeq; WP_007485765.1; NZ_JH724314.1.
DR AlphaFoldDB; I8XJ62; -.
DR STRING; 997884.HMPREF1068_02686; -.
DR PATRIC; fig|997884.3.peg.2759; -.
DR eggNOG; COG1520; Bacteria.
DR eggNOG; COG4225; Bacteria.
DR HOGENOM; CLU_414292_0_0_10; -.
DR Proteomes; UP000003089; Unassembled WGS sequence.
DR GO; GO:0005975; P:carbohydrate metabolic process; IEA:InterPro.
DR Gene3D; 1.50.10.10; -; 1.
DR InterPro; IPR008928; 6-hairpin_glycosidase_sf.
DR InterPro; IPR012341; 6hp_glycosidase-like_sf.
DR InterPro; IPR010905; Glyco_hydro_88.
DR InterPro; IPR002372; PQQ_repeat.
DR PANTHER; PTHR33886; UNSATURATED RHAMNOGALACTURONAN HYDROLASE (EUROFUNG); 1.
DR PANTHER; PTHR33886:SF8; WALL GLYCOSYL HYDROLASE YTER, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G14630)-RELATED; 1.
DR Pfam; PF07470; Glyco_hydro_88; 1.
DR Pfam; PF13360; PQQ_2; 1.
DR SUPFAM; SSF101898; NHL repeat; 1.
DR SUPFAM; SSF48208; Six-hairpin glycosidases; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000003089};
KW Signal {ECO:0000256|SAM:SignalP}.
FT SIGNAL 1..19
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 20..662
FT /note="Glycosyl hydrolase family 88"
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5003716597"
SQ SEQUENCE 662 AA; 74853 MW; FEA4F5342B052A55 CRC64;
MKSFLITILV SLAFIQATAQ VPGKVPSSWA KEIAHTVMTR YPSALTIPFK PWCYPQGYFL
MGLDKLWRST GDRKYYDYMM NWANEVVRPD GSLVYFKGRS MDDMMAGSVA VWAYQQTKEE
KFRKAADIIR KSYDDYPRTS DGVFWHGRGT VGQIWVDGVF MGQMFLTKYG HYIGDTDYCF
NEASRQLIGM YMHLKKGESG LFYHGWDEDK DARWADPVTG MAPEVWSEGL GWYALIMVET
LEIFPKTHSQ YKKLVSITQE LMQGLKNCQD PVTGLWYQVV DKGDQPGNWQ ETSGSGMFVY
ALQRAIELGI IPAGEYKNCV GKGYMGLLSK AKISSVDGLI DLQDANNGLG IQKDYQTYVT
RPKKMNGQEV ISSFLWATWI VENSNQYPYL EYCKTFVCTD YSQGKVFIFE NGRIVWEHDA
PLSNDLWLLE NGNILFTTGQ GVLEVNQNKD TVFHYTSKSH IFACQRLKNG DTFIGECNSG
RLLEVNPKGE VVKEVCILPP GVTDGKKSFI RNARRLDNGH YLVAHYGGKR VVEYDENGKS
CWEVEVSGGA HSVIRLDNGN TLVAVADADK NPRIMEFDKA GIVVWELSNR DLKGSPLKFL
SGMQYLPGVG LLFTNWQGHG VKDKAPHMFL VDRQKNILCT FGLHDSIQTL SSVYIPGKGC
FH
//