ID I9KWW2_LACPE Unreviewed; 331 AA.
AC I9KWW2;
DT 03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 03-OCT-2012, sequence version 1.
DT 27-MAR-2024, entry version 55.
DE SubName: Full=Raffinose-related transcription regulator LacI family {ECO:0000313|EMBL:EIW12439.1};
GN Name=rafR {ECO:0000313|EMBL:EIW12439.1};
GN ORFNames=KCA1_2838 {ECO:0000313|EMBL:EIW12439.1};
OS Lactiplantibacillus pentosus KCA1.
OC Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae;
OC Lactiplantibacillus.
OX NCBI_TaxID=1136177 {ECO:0000313|EMBL:EIW12439.1};
RN [1] {ECO:0000313|EMBL:EIW12439.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=KCA1 {ECO:0000313|EMBL:EIW12439.1};
RX PubMed=23527145;
RA Anukam K.C., Macklaim J.M., Gloor G.B., Reid G., Boekhorst J., Renckens B.,
RA van Hijum S.A., Siezen R.J.;
RT "Genome Sequence of Lactobacillus pentosus KCA1: Vaginal Isolate from a
RT Healthy Premenopausal Woman.";
RL PLoS ONE 8:E59239-E59239(2013).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EIW12439.1}.
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DR EMBL; AKAO01000083; EIW12439.1; -; Genomic_DNA.
DR RefSeq; WP_003640045.1; NZ_CM001538.1.
DR AlphaFoldDB; I9KWW2; -.
DR PATRIC; fig|1136177.4.peg.2900; -.
DR eggNOG; COG1609; Bacteria.
DR HOGENOM; CLU_037628_1_2_9; -.
DR Proteomes; UP000005826; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd01392; HTH_LacI; 1.
DR CDD; cd01544; PBP1_GalR; 1.
DR Gene3D; 3.40.50.2300; -; 1.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR000843; HTH_LacI.
DR InterPro; IPR046335; LacI/GalR-like_sensor.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR InterPro; IPR028082; Peripla_BP_I.
DR PANTHER; PTHR30146:SF151; HTH-TYPE TRANSCRIPTIONAL REPRESSOR MELR; 1.
DR PANTHER; PTHR30146; LACI-RELATED TRANSCRIPTIONAL REPRESSOR; 1.
DR Pfam; PF00356; LacI; 1.
DR Pfam; PF13377; Peripla_BP_3; 1.
DR PRINTS; PR00036; HTHLACI.
DR SMART; SM00354; HTH_LACI; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR SUPFAM; SSF53822; Periplasmic binding protein-like I; 1.
DR PROSITE; PS00356; HTH_LACI_1; 1.
DR PROSITE; PS50932; HTH_LACI_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 3..59
FT /note="HTH lacI-type"
FT /evidence="ECO:0000259|PROSITE:PS50932"
SQ SEQUENCE 331 AA; 37016 MW; 7248350E099DB492 CRC64;
MAATLKDIAN KAGVSLATVS RVLNKDQSLS VSETTRKRIL DAAEALQYSK NKRHTITTAR
KRLAIVQWYS ESKEQDDLYY MSVRMGIERR GQDNQFEVTR IFQNNLQELG PDVDAVIAVG
KFSPTQVDDL AAVTDNLVFV DDDQFDAGFD SVITDFRLAT EKVVDYFWKR NFHHIGFIHG
SEMTTDHQQT VVDRRMLGFR AAMERRHAFD PKFVFKGDYT SESGFKMMQK AIRSLGDQLP
GAFFVANDPM AAGALKALQA SGIQVPERVK LFSFNNTSLA TFVYPELSAV NVDTELMGAT
AVSLVMSRLA GRTTTQRVEL GTNLVERAST K
//
