ID I9WIB2_9SPHN Unreviewed; 820 AA.
AC I9WIB2;
DT 03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 03-OCT-2012, sequence version 1.
DT 27-MAR-2024, entry version 48.
DE RecName: Full=RNA helicase {ECO:0000256|ARBA:ARBA00012552};
DE EC=3.6.4.13 {ECO:0000256|ARBA:ARBA00012552};
GN ORFNames=WSK_1324 {ECO:0000313|EMBL:EIZ79958.1};
OS Novosphingobium sp. Rr 2-17.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC Sphingomonadaceae; Novosphingobium.
OX NCBI_TaxID=555793 {ECO:0000313|EMBL:EIZ79958.1, ECO:0000313|Proteomes:UP000004732};
RN [1] {ECO:0000313|EMBL:EIZ79958.1, ECO:0000313|Proteomes:UP000004732}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=RR2-17 {ECO:0000313|Proteomes:UP000004732};
RX PubMed=22933764; DOI=10.1128/JB.01159-12;
RA Gan H.M., Chew T.H., Hudson A.O., Savka M.A.;
RT "Genome Sequence of Novosphingobium sp. Strain Rr 2-17, a Nopaline Crown
RT Gall-Associated Bacterium Isolated from Vitis vinifera L. Grapevine.";
RL J. Bacteriol. 194:5137-5138(2012).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EIZ79958.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AKFJ01000017; EIZ79958.1; -; Genomic_DNA.
DR RefSeq; WP_008994273.1; NZ_AKFJ01000017.1.
DR AlphaFoldDB; I9WIB2; -.
DR PATRIC; fig|555793.3.peg.1327; -.
DR eggNOG; COG1643; Bacteria.
DR OrthoDB; 9805617at2; -.
DR Proteomes; UP000004732; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR CDD; cd18791; SF2_C_RHA; 1.
DR Gene3D; 1.20.120.1080; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR002464; DNA/RNA_helicase_DEAH_CS.
DR InterPro; IPR048333; HA2_WH.
DR InterPro; IPR007502; Helicase-assoc_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR010225; HrpB.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR013689; RNA_helicase_ATP-dep_HrpB_C.
DR NCBIfam; TIGR01970; DEAH_box_HrpB; 1.
DR PANTHER; PTHR43519; ATP-DEPENDENT RNA HELICASE HRPB; 1.
DR PANTHER; PTHR43519:SF1; ATP-DEPENDENT RNA HELICASE HRPB; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF04408; HA2_N; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF08482; HrpB_C; 1.
DR PIRSF; PIRSF005496; ATP_hel_hrpB; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00847; HA2; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR PROSITE; PS00690; DEAH_ATP_HELICASE; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Helicase {ECO:0000256|ARBA:ARBA00022806, ECO:0000313|EMBL:EIZ79958.1};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000004732}.
FT DOMAIN 15..178
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 201..372
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT REGION 792..820
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 820 AA; 88889 MW; 0EA1028EB62872DB CRC64;
MNSTLPVHVV LPELLDALRE SNGTVLIAPP GAGKTTGISP ALLGEKWCKG TVILLSPRRV
AARAAAERMA EALGEAAGET IGYVTRLDVK RSARTRVLVM TEAIFVATIV ADPELSGISA
VLFDEAHERH LDSDLGLALA IETQSVLRED LRLLVMSATI DGTRFSRLLG DGTRVIESEG
KAWPLAVRWL GGAPDKRIED AMASAIATAW REQADTGGDV LAFLPGVREI ERVAERLADR
LPQALVLPLH GQCDPSAQRA AIRRDPQGRR RVVLATAIAE TSLTLDGVSV VVDAGLSRRA
EFDKAAGVTR LVTHRASRAS AAQRAGRAAR QGPGTAYRLW EEAAHAGRPE FDPPEILTSD
LAPLVLSLAR WGSGDPAAMA WLDVPPRRAL DAAKVSLVAL GALDDAGRIT EFGRKVASLP
MDPAQAAMIL RATEMGSGRT ASKLALLLQE RGLGGSGDDL AQRLTRWNGD RSPRAQASRK
LAEGWERRAT GLVRATEESD VPLGILLALG RPDMLARRRD ATGESWLSAG GRGYVLDPTS
PLASREWLAI GDAQGSAKGA RILSGVTLES AEIEQWLSSR IDRRTVLRWN EEDGRVEARL
ERRLGAITLA SGPDPSPDPA AIRAFLLDRV RQKGLALVPF SKSAEALLRR ARYAGIEALS
DEALLADLDD WLGPLLNRRL DAIDQGALTQ ALRSRLNWDG QQALDRLAPP EFRSPAGTVH
AIDYEDEGGP SVEVRVQALF GLDRHPGFGR PEQPLLLKLT SPPGRPIQTT RDLPGFWRGS
WRDVQRDMKG RYPRHRWPDE PWAEDPSLKT RNAFEAAKKR
//
