ID J0X1G2_9BIFI Unreviewed; 393 AA.
AC J0X1G2;
DT 03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 03-OCT-2012, sequence version 1.
DT 27-MAR-2024, entry version 42.
DE RecName: Full=HTH cro/C1-type domain-containing protein {ECO:0000259|PROSITE:PS50943};
GN ORFNames=HMPREF9156_00443 {ECO:0000313|EMBL:EJD65679.1};
OS Scardovia wiggsiae F0424.
OC Bacteria; Actinomycetota; Actinomycetes; Bifidobacteriales;
OC Bifidobacteriaceae; Scardovia.
OX NCBI_TaxID=857290 {ECO:0000313|EMBL:EJD65679.1, ECO:0000313|Proteomes:UP000006415};
RN [1] {ECO:0000313|EMBL:EJD65679.1, ECO:0000313|Proteomes:UP000006415}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=F0424 {ECO:0000313|EMBL:EJD65679.1,
RC ECO:0000313|Proteomes:UP000006415};
RG The Broad Institute Genome Sequencing Platform;
RA Earl A., Ward D., Feldgarden M., Gevers D., Izard J., Ganesan A.,
RA Baranova O.V., Blanton J.M., Tanner A.C., Mathney J., Dewhirst F.E.,
RA Young S.K., Zeng Q., Gargeya S., Fitzgerald M., Haas B., Abouelleil A.,
RA Alvarado L., Arachchi H.M., Berlin A., Chapman S.B., Gearin G.,
RA Goldberg J., Griggs A., Gujja S., Hansen M., Heiman D., Howarth C.,
RA Larimer J., Lui A., MacDonald P.J.P., McCowen C., Montmayeur A., Murphy C.,
RA Neiman D., Pearson M., Priest M., Roberts A., Saif S., Shea T., Sisk P.,
RA Stolte C., Sykes S., Wortman J., Nusbaum C., Birren B.;
RT "The Genome Sequence of Scardovia wiggsiae F0424.";
RL Submitted (JAN-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EJD65679.1}.
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DR EMBL; AGZS01000001; EJD65679.1; -; Genomic_DNA.
DR AlphaFoldDB; J0X1G2; -.
DR STRING; 857290.HMPREF9156_00443; -.
DR eggNOG; COG1396; Bacteria.
DR HOGENOM; CLU_701868_0_0_11; -.
DR Proteomes; UP000006415; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR CDD; cd00093; HTH_XRE; 1.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR001387; Cro/C1-type_HTH.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR Pfam; PF13560; HTH_31; 1.
DR SMART; SM00530; HTH_XRE; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR PROSITE; PS50943; HTH_CROC1; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000006415}.
FT DOMAIN 333..387
FT /note="HTH cro/C1-type"
FT /evidence="ECO:0000259|PROSITE:PS50943"
FT REGION 229..260
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 229..248
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 393 AA; 44147 MW; A2C3C9443F9F70F1 CRC64;
MSFTYPSSDQ QPGLVVTVTT LHSFFDLIVR WEYTVAPKHR FRKFVVVSNR QRYEELVAQR
GETSVWYRRP IPGFDVSDPE VFSLEQFTID GVDVAFQRHA DSTSQVYVVD LGDEIIRAGK
PVVVAFRFRT RTRQQGHVVH IDIDRPTRGL DIEFHYGDAA VAEARMLDFA SIGEGGRVED
DRGTQTLRYR YDGWLFPRAG LVFFWSLPEA GAPARTRLSY PIMAPQTPAT RIPSMTTGVP
ASDSDPQHKT PVQPRRPERA CSCRTGGMTH LTVQSPPIAL TSLIGRIGQQ QDTSSLDSSS
LDRKSWGLWD VVVPSLSPKS PLSAITGEFG RRVRLRREEL ELSQEKLAER CELHWTYIGQ
VECGQRNLSL HNIVRIAKGL VSDPGELVRG LGA
//
