ID J2D186_9SPHN Unreviewed; 237 AA.
AC J2D186;
DT 03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 03-OCT-2012, sequence version 1.
DT 24-JAN-2024, entry version 38.
DE SubName: Full=Putative nucleic-acid-binding protein implicated in transcription termination {ECO:0000313|EMBL:EJK83354.1};
GN ORFNames=PMI04_02078 {ECO:0000313|EMBL:EJK83354.1};
OS Sphingobium sp. AP49.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC Sphingomonadaceae; Sphingobium.
OX NCBI_TaxID=1144307 {ECO:0000313|EMBL:EJK83354.1, ECO:0000313|Proteomes:UP000006480};
RN [1] {ECO:0000313|EMBL:EJK83354.1, ECO:0000313|Proteomes:UP000006480}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AP49 {ECO:0000313|EMBL:EJK83354.1,
RC ECO:0000313|Proteomes:UP000006480};
RX PubMed=23045501; DOI=10.1128/JB.01243-12;
RA Brown S.D., Utturkar S.M., Klingeman D.M., Johnson C.M., Martin S.L.,
RA Land M.L., Lu T.Y., Schadt C.W., Doktycz M.J., Pelletier D.A.;
RT "Twenty-one genome sequences from Pseudomonas species and 19 genome
RT sequences from diverse bacteria isolated from the rhizosphere and
RT endosphere of Populus deltoides.";
RL J. Bacteriol. 194:5991-5993(2012).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EJK83354.1}.
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DR EMBL; AJVL01000054; EJK83354.1; -; Genomic_DNA.
DR RefSeq; WP_007709446.1; NZ_CP124576.1.
DR AlphaFoldDB; J2D186; -.
DR STRING; 1144307.PMI04_02078; -.
DR PATRIC; fig|1144307.3.peg.1838; -.
DR eggNOG; COG2740; Bacteria.
DR OrthoDB; 9799836at2; -.
DR Proteomes; UP000006480; Unassembled WGS sequence.
DR Gene3D; 3.30.1330.30; -; 1.
DR Gene3D; 3.30.1230.10; YlxR-like; 1.
DR InterPro; IPR029064; Ribosomal_eL30-like_sf.
DR InterPro; IPR037465; YlxR.
DR InterPro; IPR035931; YlxR-like_sf.
DR InterPro; IPR007393; YlxR_dom.
DR PANTHER; PTHR34215; BLL0784 PROTEIN; 1.
DR PANTHER; PTHR34215:SF1; YLXR DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF04296; YlxR; 1.
DR SUPFAM; SSF55315; L30e-like; 1.
DR SUPFAM; SSF64376; YlxR-like; 1.
PE 4: Predicted;
FT DOMAIN 4..84
FT /note="YlxR"
FT /evidence="ECO:0000259|Pfam:PF04296"
SQ SEQUENCE 237 AA; 24797 MW; CF8B4AE0E933DAE0 CRC64;
MTERKCILTG DRADPETLIR LAVGPEGQVL PDIRAKAPGR GAWIGVSRVE LEAALAKGKL
KGALARAFKE TNLHIPEDLA EKVEAGLRQD LLSRLGLEAK ASMLLTGSEK IEVACRKGIV
KMLLHAADAG ADGNRKLDQA LRVGQEAEGT DLAGIVLPVD RGALSMAMGR DNVVHIAVTD
SRAAARLRTA LSRLESYLGC ATGAPVHGEQ DSADALGVVV AWNDASAPAS ADDDVKG
//