ID J2DID8_9SPHN Unreviewed; 315 AA.
AC J2DID8;
DT 03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 03-OCT-2012, sequence version 1.
DT 24-JAN-2024, entry version 51.
DE SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:EJK82622.1};
GN ORFNames=PMI04_02528 {ECO:0000313|EMBL:EJK82622.1};
OS Sphingobium sp. AP49.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC Sphingomonadaceae; Sphingobium.
OX NCBI_TaxID=1144307 {ECO:0000313|EMBL:EJK82622.1, ECO:0000313|Proteomes:UP000006480};
RN [1] {ECO:0000313|EMBL:EJK82622.1, ECO:0000313|Proteomes:UP000006480}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AP49 {ECO:0000313|EMBL:EJK82622.1,
RC ECO:0000313|Proteomes:UP000006480};
RX PubMed=23045501; DOI=10.1128/JB.01243-12;
RA Brown S.D., Utturkar S.M., Klingeman D.M., Johnson C.M., Martin S.L.,
RA Land M.L., Lu T.Y., Schadt C.W., Doktycz M.J., Pelletier D.A.;
RT "Twenty-one genome sequences from Pseudomonas species and 19 genome
RT sequences from diverse bacteria isolated from the rhizosphere and
RT endosphere of Populus deltoides.";
RL J. Bacteriol. 194:5991-5993(2012).
CC -!- SIMILARITY: Belongs to the LysR transcriptional regulatory family.
CC {ECO:0000256|ARBA:ARBA00009437}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EJK82622.1}.
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DR EMBL; AJVL01000058; EJK82622.1; -; Genomic_DNA.
DR AlphaFoldDB; J2DID8; -.
DR STRING; 1144307.PMI04_02528; -.
DR PATRIC; fig|1144307.3.peg.2293; -.
DR eggNOG; COG0583; Bacteria.
DR OrthoDB; 8339333at2; -.
DR Proteomes; UP000006480; Unassembled WGS sequence.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR CDD; cd08417; PBP2_Nitroaromatics_like; 1.
DR Gene3D; 3.40.190.10; Periplasmic binding protein-like II; 2.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR005119; LysR_subst-bd.
DR InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR InterPro; IPR037402; YidZ_PBP2.
DR PANTHER; PTHR30118; HTH-TYPE TRANSCRIPTIONAL REGULATOR LEUO-RELATED; 1.
DR PANTHER; PTHR30118:SF15; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF00126; HTH_1; 1.
DR Pfam; PF03466; LysR_substrate; 1.
DR PRINTS; PR00039; HTHLYSR.
DR SUPFAM; SSF53850; Periplasmic binding protein-like II; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS50931; HTH_LYSR; 1.
PE 3: Inferred from homology;
FT DOMAIN 7..64
FT /note="HTH lysR-type"
FT /evidence="ECO:0000259|PROSITE:PS50931"
SQ SEQUENCE 315 AA; 34040 MW; 0D1717BF374717FC CRC64;
MLGGAHFDLN MLVVLGLLLR TKSVTRTAQH LGVSQPSVSR SLAQLRALLG DPLLVRTAGG
MELTRRAEEL GPSLQDWLAT TAGLLEPPRF DPATLERRFR VASTDFGVAA VVAPTLAEIA
RTAPGAAIDI EPLTGDMVAR LTAGEIDLII SGLDPDPAQT YERFLFTETF SCVVDRHHAL
SRHPVDEPLS IEDFLSCPHI SFVVGDSGFD RIEVRLGDRA PLRRVIARLP YFQAAPHMIQ
QSGALMTLPT RAARAIAQAH DLACLPAPDV IGSFGYRLLW NQRSHRDPAI AWLCDMLATH
CGAGETPAAV HSKAA
//