ID J2GFA2_9SPHN Unreviewed; 472 AA.
AC J2GFA2;
DT 03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 03-OCT-2012, sequence version 1.
DT 24-JAN-2024, entry version 33.
DE SubName: Full=Putative Zn-dependent protease-like protein {ECO:0000313|EMBL:EJL21158.1};
GN ORFNames=PMI02_05228 {ECO:0000313|EMBL:EJL21158.1};
OS Novosphingobium sp. AP12.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC Sphingomonadaceae; Novosphingobium.
OX NCBI_TaxID=1144305 {ECO:0000313|EMBL:EJL21158.1, ECO:0000313|Proteomes:UP000007515};
RN [1] {ECO:0000313|EMBL:EJL21158.1, ECO:0000313|Proteomes:UP000007515}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AP12 {ECO:0000313|EMBL:EJL21158.1,
RC ECO:0000313|Proteomes:UP000007515};
RX PubMed=23045501; DOI=10.1128/JB.01243-12;
RA Brown S.D., Utturkar S.M., Klingeman D.M., Johnson C.M., Martin S.L.,
RA Land M.L., Lu T.Y., Schadt C.W., Doktycz M.J., Pelletier D.A.;
RT "Twenty-one genome sequences from Pseudomonas species and 19 genome
RT sequences from diverse bacteria isolated from the rhizosphere and
RT endosphere of Populus deltoides.";
RL J. Bacteriol. 194:5991-5993(2012).
CC -!- SIMILARITY: Belongs to the peptidase U62 family.
CC {ECO:0000256|ARBA:ARBA00005836}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EJL21158.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AKKE01000171; EJL21158.1; -; Genomic_DNA.
DR RefSeq; WP_007687879.1; NZ_AKKE01000171.1.
DR AlphaFoldDB; J2GFA2; -.
DR STRING; 1144305.PMI02_05228; -.
DR PATRIC; fig|1144305.3.peg.4765; -.
DR eggNOG; COG0312; Bacteria.
DR OrthoDB; 9803213at2; -.
DR Proteomes; UP000007515; Unassembled WGS sequence.
DR GO; GO:0008237; F:metallopeptidase activity; IEA:InterPro.
DR GO; GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
DR Gene3D; 3.30.2290.10; PmbA/TldD superfamily; 1.
DR InterPro; IPR045569; Metalloprtase-TldD/E_C.
DR InterPro; IPR045570; Metalloprtase-TldD/E_cen_dom.
DR InterPro; IPR002510; Metalloprtase-TldD/E_N.
DR InterPro; IPR025502; TldD.
DR InterPro; IPR035068; TldD/PmbA_N.
DR InterPro; IPR036059; TldD/PmbA_sf.
DR PANTHER; PTHR30624:SF4; METALLOPROTEASE TLDD; 1.
DR PANTHER; PTHR30624; UNCHARACTERIZED PROTEIN TLDD AND PMBA; 1.
DR Pfam; PF01523; PmbA_TldD_1st; 1.
DR Pfam; PF19290; PmbA_TldD_2nd; 1.
DR Pfam; PF19289; PmbA_TldD_3rd; 1.
DR PIRSF; PIRSF004919; TldD; 1.
DR SUPFAM; SSF111283; Putative modulator of DNA gyrase, PmbA/TldD; 1.
PE 3: Inferred from homology;
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Protease {ECO:0000256|ARBA:ARBA00022670, ECO:0000313|EMBL:EJL21158.1};
KW Reference proteome {ECO:0000313|Proteomes:UP000007515}.
FT DOMAIN 34..90
FT /note="Metalloprotease TldD/E N-terminal"
FT /evidence="ECO:0000259|Pfam:PF01523"
FT DOMAIN 121..229
FT /note="Metalloprotease TldD/E central"
FT /evidence="ECO:0000259|Pfam:PF19290"
FT DOMAIN 237..470
FT /note="Metalloprotease TldD/E C-terminal"
FT /evidence="ECO:0000259|Pfam:PF19289"
SQ SEQUENCE 472 AA; 49723 MW; A506533517AF3F32 CRC64;
MTMTDPRSLL YAQLSPEEAQ VLAAETLKSC DDGELFMQFA ASEAFGFDDG RLKTADYSRD
AGFGLRGVSG EMTGFAHANE ISAAAIRRAG ETLQLLDPAT GKRSAPPAKT NARLYTDASP
LDLVGFAEKV RLLETIDAAA RARDPRVSQV SASLSGSWSV VEIVRPDGYI GTDVRPLVRL
NVSIVAESNG RRETGSFGMG GRFLYDDLFK PENWNEAIDT ALAQALINLE SVDAPAGEFQ
VLCGAGWPGV LLHEAIGHGL EGDFNRKGTS AFSGRIGERV AAPGVTIVDD GAIPGRRGSL
TIDDEGTPTR ETVLIEDGIL KGYMQDRLNA RLMGVEPTGN GRRENYAHAP QVRMTNTFMK
GGNDDPAEML AGMKKGIFAK NFGGGQVDIV SGKFVFSCTE AYMVENGKLG APIKGATLIG
DGPSVLTRVK AIGNDFALDR GVGMCGKGGQ SVPAGVGQPS LLIDGLTVGG TA
//