ID J2KUW4_9BURK Unreviewed; 185 AA.
AC J2KUW4;
DT 03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 03-OCT-2012, sequence version 1.
DT 27-MAR-2024, entry version 50.
DE SubName: Full=PAS domain S-box {ECO:0000313|EMBL:EJL83865.1};
GN ORFNames=PMI15_02456 {ECO:0000313|EMBL:EJL83865.1};
OS Polaromonas sp. CF318.
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Comamonadaceae; Polaromonas.
OX NCBI_TaxID=1144318 {ECO:0000313|EMBL:EJL83865.1, ECO:0000313|Proteomes:UP000007275};
RN [1] {ECO:0000313|EMBL:EJL83865.1, ECO:0000313|Proteomes:UP000007275}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CF318 {ECO:0000313|EMBL:EJL83865.1,
RC ECO:0000313|Proteomes:UP000007275};
RX PubMed=23045501; DOI=10.1128/JB.01243-12;
RA Brown S.D., Utturkar S.M., Klingeman D.M., Johnson C.M., Martin S.L.,
RA Land M.L., Lu T.Y., Schadt C.W., Doktycz M.J., Pelletier D.A.;
RT "Twenty-one genome sequences from Pseudomonas species and 19 genome
RT sequences from diverse bacteria isolated from the rhizosphere and
RT endosphere of Populus deltoides.";
RL J. Bacteriol. 194:5991-5993(2012).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EJL83865.1}.
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DR EMBL; AKIV01000063; EJL83865.1; -; Genomic_DNA.
DR RefSeq; WP_007868819.1; NZ_AKIV01000063.1.
DR AlphaFoldDB; J2KUW4; -.
DR PATRIC; fig|1144318.3.peg.2389; -.
DR OrthoDB; 8533716at2; -.
DR Proteomes; UP000007275; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd06170; LuxR_C_like; 1.
DR CDD; cd00130; PAS; 1.
DR Gene3D; 3.30.450.20; PAS domain; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR016032; Sig_transdc_resp-reg_C-effctor.
DR InterPro; IPR000792; Tscrpt_reg_LuxR_C.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR NCBIfam; TIGR00229; sensory_box; 1.
DR PANTHER; PTHR44688; -; 1.
DR PANTHER; PTHR44688:SF16; TRANSCRIPTIONAL ACTIVATOR PROTEIN BJAR1; 1.
DR Pfam; PF00196; GerE; 1.
DR Pfam; PF13426; PAS_9; 1.
DR PRINTS; PR00038; HTHLUXR.
DR SMART; SM00421; HTH_LUXR; 1.
DR SMART; SM00091; PAS; 1.
DR SUPFAM; SSF46894; C-terminal effector domain of the bipartite response regulators; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR PROSITE; PS00622; HTH_LUXR_1; 1.
DR PROSITE; PS50043; HTH_LUXR_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125}.
FT DOMAIN 120..185
FT /note="HTH luxR-type"
FT /evidence="ECO:0000259|PROSITE:PS50043"
SQ SEQUENCE 185 AA; 20898 MW; C4D2C49E8049B890 CRC64;
MEVDYQLAFD LAPVGLVLSR NRSIVDCNQH LCEMFGATRE QLAGQSFLIL YPSADEYERI
GARMLPALNT RGLYSDDRIM KRVDGRNKGE TFWCHVTGRA LNRSAPHEAG IWTFEDLSSR
RPVTAELTAR EREVAAHLMD GLTSKEIGRA LVISHRTVEI YRARLMRKYK ASTTADLVHK
LMAGS
//