ID J2S3T8_9PSED Unreviewed; 301 AA.
AC J2S3T8;
DT 03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 03-OCT-2012, sequence version 1.
DT 27-MAR-2024, entry version 56.
DE SubName: Full=DNA-binding domain-containing protein, AraC-type {ECO:0000313|EMBL:EJM61921.1};
GN ORFNames=PMI30_05060 {ECO:0000313|EMBL:EJM61921.1};
OS Pseudomonas sp. GM50.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
OC Pseudomonadaceae; Pseudomonas.
OX NCBI_TaxID=1144332 {ECO:0000313|EMBL:EJM61921.1, ECO:0000313|Proteomes:UP000007513};
RN [1] {ECO:0000313|EMBL:EJM61921.1, ECO:0000313|Proteomes:UP000007513}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=GM50 {ECO:0000313|EMBL:EJM61921.1,
RC ECO:0000313|Proteomes:UP000007513};
RX PubMed=23045501; DOI=10.1128/JB.01243-12;
RA Brown S.D., Utturkar S.M., Klingeman D.M., Johnson C.M., Martin S.L.,
RA Land M.L., Lu T.Y., Schadt C.W., Doktycz M.J., Pelletier D.A.;
RT "Twenty-one genome sequences from Pseudomonas species and 19 genome
RT sequences from diverse bacteria isolated from the rhizosphere and
RT endosphere of Populus deltoides.";
RL J. Bacteriol. 194:5991-5993(2012).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EJM61921.1}.
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DR EMBL; AKJK01000104; EJM61921.1; -; Genomic_DNA.
DR RefSeq; WP_008013453.1; NZ_AKJK01000104.1.
DR AlphaFoldDB; J2S3T8; -.
DR PATRIC; fig|1144332.3.peg.4875; -.
DR Proteomes; UP000007513; Unassembled WGS sequence.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0009893; P:positive regulation of metabolic process; IEA:UniProt.
DR CDD; cd06976; cupin_MtlR-like_N; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 2.
DR InterPro; IPR003313; AraC-bd.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR018060; HTH_AraC.
DR InterPro; IPR018062; HTH_AraC-typ_CS.
DR InterPro; IPR011051; RmlC_Cupin_sf.
DR PANTHER; PTHR46796:SF2; HTH-TYPE TRANSCRIPTIONAL ACTIVATOR RHAS; 1.
DR PANTHER; PTHR46796; HTH-TYPE TRANSCRIPTIONAL ACTIVATOR RHAS-RELATED; 1.
DR Pfam; PF02311; AraC_binding; 1.
DR Pfam; PF12833; HTH_18; 1.
DR SMART; SM00342; HTH_ARAC; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 2.
DR SUPFAM; SSF51182; RmlC-like cupins; 1.
DR PROSITE; PS00041; HTH_ARAC_FAMILY_1; 1.
DR PROSITE; PS01124; HTH_ARAC_FAMILY_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000313|EMBL:EJM61921.1};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 194..292
FT /note="HTH araC/xylS-type"
FT /evidence="ECO:0000259|PROSITE:PS01124"
SQ SEQUENCE 301 AA; 34511 MW; 30E778798EB69C55 CRC64;
MNHHVTADKP PALEVILNEP QHSFRWYEHD YPFDLARWNH HPEFEIHLIR EGSGRLLAGD
YIGVFEAGHV ALIGPGLPHD WISDLGKGEV IEGRDVVLQF DGQMLMQLRD KVPELSELQI
LFRQAAQGIE FHGNTRKKAA RLLEDIGQCH GLQRLCLFLS LLQLLASAPD NEKQTLASLQ
YAPMLDALTA QRMSIVFDYI LNDLADELRM SVIAQRLDMN EPAFSKFFKR ATGHTFVDLT
RKLRVQRACR LLAQSSFSVA DICFEVGYAN LSNFNRHFRH EMQETPSQYR QRLQRVVAVS
H
//
