ID   J2SNC6_9PSED            Unreviewed;       259 AA.
AC   J2SNC6;
DT   03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT   03-OCT-2012, sequence version 1.
DT   27-MAR-2024, entry version 55.
DE   SubName: Full=DNA-binding domain-containing protein, AraC-type {ECO:0000313|EMBL:EJM68636.1};
GN   ORFNames=PMI31_04993 {ECO:0000313|EMBL:EJM68636.1};
OS   Pseudomonas sp. GM55.
OC   Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
OC   Pseudomonadaceae; Pseudomonas.
OX   NCBI_TaxID=1144333 {ECO:0000313|EMBL:EJM68636.1, ECO:0000313|Proteomes:UP000007268};
RN   [1] {ECO:0000313|EMBL:EJM68636.1, ECO:0000313|Proteomes:UP000007268}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=GM55 {ECO:0000313|EMBL:EJM68636.1,
RC   ECO:0000313|Proteomes:UP000007268};
RX   PubMed=23045501; DOI=10.1128/JB.01243-12;
RA   Brown S.D., Utturkar S.M., Klingeman D.M., Johnson C.M., Martin S.L.,
RA   Land M.L., Lu T.Y., Schadt C.W., Doktycz M.J., Pelletier D.A.;
RT   "Twenty-one genome sequences from Pseudomonas species and 19 genome
RT   sequences from diverse bacteria isolated from the rhizosphere and
RT   endosphere of Populus deltoides.";
RL   J. Bacteriol. 194:5991-5993(2012).
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:EJM68636.1}.
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DR   EMBL; AKJJ01000107; EJM68636.1; -; Genomic_DNA.
DR   RefSeq; WP_008021689.1; NZ_AKJJ01000107.1.
DR   AlphaFoldDB; J2SNC6; -.
DR   PATRIC; fig|1144333.3.peg.4878; -.
DR   Proteomes; UP000007268; Unassembled WGS sequence.
DR   GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR   GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR   GO; GO:0009893; P:positive regulation of metabolic process; IEA:UniProt.
DR   CDD; cd06124; cupin_NimR-like_N; 1.
DR   Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR   Gene3D; 2.60.120.10; Jelly Rolls; 1.
DR   InterPro; IPR003313; AraC-bd.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR018060; HTH_AraC.
DR   InterPro; IPR018062; HTH_AraC-typ_CS.
DR   InterPro; IPR014710; RmlC-like_jellyroll.
DR   InterPro; IPR011051; RmlC_Cupin_sf.
DR   PANTHER; PTHR11019; HTH-TYPE TRANSCRIPTIONAL REGULATOR NIMR; 1.
DR   PANTHER; PTHR11019:SF159; TRANSCRIPTIONAL REGULATOR-RELATED; 1.
DR   Pfam; PF02311; AraC_binding; 1.
DR   Pfam; PF12833; HTH_18; 1.
DR   SMART; SM00342; HTH_ARAC; 1.
DR   SUPFAM; SSF46689; Homeodomain-like; 1.
DR   SUPFAM; SSF51182; RmlC-like cupins; 1.
DR   PROSITE; PS00041; HTH_ARAC_FAMILY_1; 1.
DR   PROSITE; PS01124; HTH_ARAC_FAMILY_2; 1.
PE   4: Predicted;
KW   DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000313|EMBL:EJM68636.1}.
FT   DOMAIN          156..255
FT                   /note="HTH araC/xylS-type"
FT                   /evidence="ECO:0000259|PROSITE:PS01124"
SQ   SEQUENCE   259 AA;  28444 MW;  CD817CD5F06AEC8F CRC64;
     MALAAPPDLS DTDVPVQPLA RTYPRGLYIE PHEHVWGQLL YAMSGVMWVE TPHEALVVPP
     QRAVWLPPGV PHGIRVVSDL QMRNIYLRPS LAATLDDSVQ VIEVGGLLRE LIVGLVEQGN
     DGPPEYYDAL VGLALLELKR ARRSLLKIPL PDDSDRRLMN LCQAVMSAPS LAIPFEQHAE
     TAGASVRTLA RLFKDGLGMG FAEWRRQVQL ATAVAELIQG VPVSAIAREL GYSPSSFSDM
     FRRELGVAPS QFPVAQRQD
//