ID J2UT82_9BURK Unreviewed; 794 AA.
AC J2UT82;
DT 03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 03-OCT-2012, sequence version 1.
DT 27-MAR-2024, entry version 45.
DE SubName: Full=Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EJL94332.1};
GN ORFNames=PMI16_00261 {ECO:0000313|EMBL:EJL94332.1};
OS Herbaspirillum sp. CF444.
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Oxalobacteraceae; Herbaspirillum.
OX NCBI_TaxID=1144319 {ECO:0000313|EMBL:EJL94332.1, ECO:0000313|Proteomes:UP000007296};
RN [1] {ECO:0000313|EMBL:EJL94332.1, ECO:0000313|Proteomes:UP000007296}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CF444 {ECO:0000313|EMBL:EJL94332.1,
RC ECO:0000313|Proteomes:UP000007296};
RX PubMed=23045501; DOI=10.1128/JB.01243-12;
RA Brown S.D., Utturkar S.M., Klingeman D.M., Johnson C.M., Martin S.L.,
RA Land M.L., Lu T.Y., Schadt C.W., Doktycz M.J., Pelletier D.A.;
RT "Twenty-one genome sequences from Pseudomonas species and 19 genome
RT sequences from diverse bacteria isolated from the rhizosphere and
RT endosphere of Populus deltoides.";
RL J. Bacteriol. 194:5991-5993(2012).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EJL94332.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AKJW01000008; EJL94332.1; -; Genomic_DNA.
DR RefSeq; WP_007875571.1; NZ_AKJW01000008.1.
DR AlphaFoldDB; J2UT82; -.
DR STRING; 1144319.PMI16_00261; -.
DR PATRIC; fig|1144319.3.peg.260; -.
DR eggNOG; COG5000; Bacteria.
DR eggNOG; COG5001; Bacteria.
DR OrthoDB; 9813903at2; -.
DR Proteomes; UP000007296; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR GO; GO:0007165; P:signal transduction; IEA:InterPro.
DR CDD; cd01948; EAL; 1.
DR CDD; cd01949; GGDEF; 1.
DR CDD; cd06225; HAMP; 1.
DR Gene3D; 3.30.70.270; -; 1.
DR Gene3D; 6.10.340.10; -; 1.
DR Gene3D; 3.20.20.450; EAL domain; 1.
DR InterPro; IPR029150; dCache_3.
DR InterPro; IPR001633; EAL_dom.
DR InterPro; IPR035919; EAL_sf.
DR InterPro; IPR000160; GGDEF_dom.
DR InterPro; IPR003660; HAMP_dom.
DR InterPro; IPR029787; Nucleotide_cyclase.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR NCBIfam; TIGR00254; GGDEF; 1.
DR PANTHER; PTHR33121; CYCLIC DI-GMP PHOSPHODIESTERASE PDEF; 1.
DR PANTHER; PTHR33121:SF71; CYCLIC DI-GMP PHOSPHODIESTERASE PDEF; 1.
DR Pfam; PF14827; dCache_3; 1.
DR Pfam; PF00563; EAL; 1.
DR Pfam; PF00990; GGDEF; 1.
DR Pfam; PF00672; HAMP; 1.
DR SMART; SM00052; EAL; 1.
DR SMART; SM00267; GGDEF; 1.
DR SMART; SM00304; HAMP; 1.
DR SUPFAM; SSF141868; EAL domain-like; 1.
DR SUPFAM; SSF158472; HAMP domain-like; 1.
DR SUPFAM; SSF55073; Nucleotide cyclase; 1.
DR PROSITE; PS50883; EAL; 1.
DR PROSITE; PS50887; GGDEF; 1.
DR PROSITE; PS50885; HAMP; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 277..298
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 299..351
FT /note="HAMP"
FT /evidence="ECO:0000259|PROSITE:PS50885"
FT DOMAIN 387..519
FT /note="GGDEF"
FT /evidence="ECO:0000259|PROSITE:PS50887"
FT DOMAIN 528..781
FT /note="EAL"
FT /evidence="ECO:0000259|PROSITE:PS50883"
SQ SEQUENCE 794 AA; 87414 MW; C3A76ADABE9C4D6E CRC64;
MRWHRLENRI VALFIVLILL VQLAGFVAIR KAIDENARAS IRDELIIGER VFLRLLEQNA
DKLTQGARLL ASDFGFRQAI GTDDRGTITS VLENHGARIG STLSMLIGTD QKIKASTQDH
PSADLQRSSL ELVAKAAETN GASDTVIVDD SLFQIVAVPV RAPVTIGWVV MGFPVDQKLI
SDMRALSSLQ LSVMVSTRDG QWQQDVSTLP KEEAGMLLGQ LPQQLSASSF IPQLKIGDND
YSARLLVLAK GASNQSAVAV LQRSISEAVA PYRRLQLILL TISVIGVAMA IFASAFVARR
ITSPLRSLAD IAKRLGAGDY RARIDIKGGD EIGKLAEAFE SMRTGIANRE LEIRRLAYWD
PLTDLPNRVQ FATLLNAAIE RAKASHGQCH ILMMDLDRFQ HVNDVLGHSF GDSLLREVGR
RLELQLEREN DKVARLGGDE YAILLPATDA TEAIRQAKRI LHSLEMPISI GDQTVDLGAG
IGIAGYPENG QDSDTLLSSA EVAMYVAKRR GSGFTLYDPS IDKSSQESLS LLSELRRALD
RNEFLLYAQP KVELATGKVV GAEALVRWVH PEKGFIGPDN FIPFAETTGF IRMLTSWMLN
KAAVLCAELQ KKGITLKFSV NLSTRDLLDQ DLPMLFADIL ARNQLSPSSM CLEITESAIM
DDPIRAQLTL ERLHGMGVEL AIDDFGTGYS SLAYLKRLPV DELKIDKSFV MNMEHDADDA
KIVKSTIDLG HNLGLRVVAE GLETLAVWNL LKQMGCDQAQ GYYMSKPMPG DRFAEWLEQW
KAPEMPGQSE NVAI
//
