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Database: UniProt
Entry: J3CWV6_9BRAD
LinkDB: J3CWV6_9BRAD
Original site: J3CWV6_9BRAD 
ID   J3CWV6_9BRAD            Unreviewed;       459 AA.
AC   J3CWV6;
DT   03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT   03-OCT-2012, sequence version 1.
DT   24-JAN-2024, entry version 47.
DE   SubName: Full=UDP-N-acetylmuramyl pentapeptide synthase {ECO:0000313|EMBL:EJN14334.1};
GN   ORFNames=PMI42_02104 {ECO:0000313|EMBL:EJN14334.1};
OS   Bradyrhizobium sp. YR681.
OC   Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
OC   Nitrobacteraceae; Bradyrhizobium.
OX   NCBI_TaxID=1144344 {ECO:0000313|EMBL:EJN14334.1, ECO:0000313|Proteomes:UP000007272};
RN   [1] {ECO:0000313|EMBL:EJN14334.1, ECO:0000313|Proteomes:UP000007272}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=YR681 {ECO:0000313|EMBL:EJN14334.1,
RC   ECO:0000313|Proteomes:UP000007272};
RX   PubMed=23045501; DOI=10.1128/JB.01243-12;
RA   Brown S.D., Utturkar S.M., Klingeman D.M., Johnson C.M., Martin S.L.,
RA   Land M.L., Lu T.Y., Schadt C.W., Doktycz M.J., Pelletier D.A.;
RT   "Twenty-one genome sequences from Pseudomonas species and 19 genome
RT   sequences from diverse bacteria isolated from the rhizosphere and
RT   endosphere of Populus deltoides.";
RL   J. Bacteriol. 194:5991-5993(2012).
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:EJN14334.1}.
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DR   EMBL; AKIY01000083; EJN14334.1; -; Genomic_DNA.
DR   RefSeq; WP_008133089.1; NZ_AKIY01000083.1.
DR   AlphaFoldDB; J3CWV6; -.
DR   PATRIC; fig|1144344.3.peg.1973; -.
DR   OrthoDB; 9801978at2; -.
DR   Proteomes; UP000007272; Unassembled WGS sequence.
DR   GO; GO:0016881; F:acid-amino acid ligase activity; IEA:InterPro.
DR   GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR   GO; GO:0007049; P:cell cycle; IEA:UniProtKB-KW.
DR   GO; GO:0051301; P:cell division; IEA:UniProtKB-KW.
DR   GO; GO:0071555; P:cell wall organization; IEA:UniProtKB-KW.
DR   GO; GO:0009252; P:peptidoglycan biosynthetic process; IEA:UniProtKB-KW.
DR   GO; GO:0008360; P:regulation of cell shape; IEA:UniProtKB-KW.
DR   Gene3D; 3.90.190.20; Mur ligase, C-terminal domain; 1.
DR   Gene3D; 3.40.1190.10; Mur-like, catalytic domain; 1.
DR   Gene3D; 3.40.1390.10; MurE/MurF, N-terminal domain; 1.
DR   InterPro; IPR036565; Mur-like_cat_sf.
DR   InterPro; IPR004101; Mur_ligase_C.
DR   InterPro; IPR036615; Mur_ligase_C_dom_sf.
DR   InterPro; IPR013221; Mur_ligase_cen.
DR   InterPro; IPR035911; MurE/MurF_N.
DR   PANTHER; PTHR43024; UDP-N-ACETYLMURAMOYL-TRIPEPTIDE--D-ALANYL-D-ALANINE LIGASE; 1.
DR   PANTHER; PTHR43024:SF1; UDP-N-ACETYLMURAMOYL-TRIPEPTIDE--D-ALANYL-D-ALANINE LIGASE; 1.
DR   Pfam; PF02875; Mur_ligase_C; 1.
DR   Pfam; PF08245; Mur_ligase_M; 1.
DR   SUPFAM; SSF53623; MurD-like peptide ligases, catalytic domain; 1.
DR   SUPFAM; SSF53244; MurD-like peptide ligases, peptide-binding domain; 1.
DR   SUPFAM; SSF63418; MurE/MurF N-terminal domain; 1.
PE   4: Predicted;
KW   Cell cycle {ECO:0000256|ARBA:ARBA00023306};
KW   Cell division {ECO:0000256|ARBA:ARBA00022618};
KW   Cell shape {ECO:0000256|ARBA:ARBA00022960};
KW   Cell wall biogenesis/degradation {ECO:0000256|ARBA:ARBA00023316};
KW   Peptidoglycan synthesis {ECO:0000256|ARBA:ARBA00022984}.
FT   DOMAIN          121..294
FT                   /note="Mur ligase central"
FT                   /evidence="ECO:0000259|Pfam:PF08245"
FT   DOMAIN          324..371
FT                   /note="Mur ligase C-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF02875"
SQ   SEQUENCE   459 AA;  48020 MW;  48F6210CA5C7E926 CRC64;
     MSGPIWTVAE VARALGAAGS FPDTPIDFVT QDSRLVKPGS LFVALSGTPS GGFVSAFASA
     RDGWEFADKA EASGAVAMIV PHEIAGIKVP QIVVKDTLIG GLWGLARAAR ARFNGPVIGL
     TGSAGKTSTK EFLAAYPNAY ASPSSFNNFW GVPLTLCNAR PDASLWVVEM GMNQTGEIAR
     LSELTRPTVA LVVNVQPVHL EKLGSLEAIR REKVSIALGL PEDGVLVLPA GLKASEWKGK
     VIRFGEKAEV HEVKHAPHGE GWQVLAVIGK KEIAFSLTPG APHRVQNALA ALAAIRAANL
     DASTLAIKLD RVGIMTGRGV EQAVGGITVI DDSFNGNPAS VAAALQSLQA RNVSGGRRIA
     VLGDMLELGD DAPSYHTALA RHLDGIDGVY CVGPLMRHLY DVLPAGKGLG WHDDPATLKA
     GEVANLLKAG DVVVVKGSKK MFWVNKFVPG LVAALQAKA
//
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