ID J3GPW1_9PSED Unreviewed; 314 AA.
AC J3GPW1;
DT 03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 03-OCT-2012, sequence version 1.
DT 27-MAR-2024, entry version 52.
DE SubName: Full=Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain {ECO:0000313|EMBL:EJM71362.1};
GN ORFNames=PMI29_01339 {ECO:0000313|EMBL:EJM71362.1};
OS Pseudomonas sp. GM49.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
OC Pseudomonadaceae; Pseudomonas.
OX NCBI_TaxID=1144331 {ECO:0000313|EMBL:EJM71362.1, ECO:0000313|Proteomes:UP000007288};
RN [1] {ECO:0000313|EMBL:EJM71362.1, ECO:0000313|Proteomes:UP000007288}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=GM49 {ECO:0000313|EMBL:EJM71362.1,
RC ECO:0000313|Proteomes:UP000007288};
RX PubMed=23045501; DOI=10.1128/JB.01243-12;
RA Brown S.D., Utturkar S.M., Klingeman D.M., Johnson C.M., Martin S.L.,
RA Land M.L., Lu T.Y., Schadt C.W., Doktycz M.J., Pelletier D.A.;
RT "Twenty-one genome sequences from Pseudomonas species and 19 genome
RT sequences from diverse bacteria isolated from the rhizosphere and
RT endosphere of Populus deltoides.";
RL J. Bacteriol. 194:5991-5993(2012).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EJM71362.1}.
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DR EMBL; AKJL01000063; EJM71362.1; -; Genomic_DNA.
DR RefSeq; WP_007995188.1; NZ_AKJL01000063.1.
DR AlphaFoldDB; J3GPW1; -.
DR PATRIC; fig|1144331.3.peg.1278; -.
DR Proteomes; UP000007288; Unassembled WGS sequence.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR CDD; cd03137; GATase1_AraC_1; 1.
DR Gene3D; 3.40.50.880; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR InterPro; IPR029062; Class_I_gatase-like.
DR InterPro; IPR002818; DJ-1/PfpI.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR018060; HTH_AraC.
DR PANTHER; PTHR43130; ARAC-FAMILY TRANSCRIPTIONAL REGULATOR; 1.
DR PANTHER; PTHR43130:SF3; THIJ_PFPI FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_5G14240); 1.
DR Pfam; PF01965; DJ-1_PfpI; 1.
DR Pfam; PF12833; HTH_18; 1.
DR SMART; SM00342; HTH_ARAC; 1.
DR SUPFAM; SSF52317; Class I glutamine amidotransferase-like; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 2.
DR PROSITE; PS01124; HTH_ARAC_FAMILY_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000313|EMBL:EJM71362.1}.
FT DOMAIN 210..308
FT /note="HTH araC/xylS-type"
FT /evidence="ECO:0000259|PROSITE:PS01124"
SQ SEQUENCE 314 AA; 34449 MW; 275E7B5577C86909 CRC64;
MISVAFVVFE GFQSMALAAM PVFEYANFSA AEALYDVRVL SENGHNLRAS GGLSVGTEAF
DGRVFDTVIV VGGDAIVEQA PEAVLDYLRA SINTARRTAS ICSGAFVMAQ AGLLDGRRAT
THWAYARELQ ARFPAIKVEA DRIYVIDGSI WTSAGMTAGI DLALAMVEKD HGAELARAVA
QKLVMYHRRA GGQSQHSALL ELEPKSDRIQ TVLGYAREHL AQPLSVEQLA QVANLSPRQF
SRAFRAETGQ SPAKAIENLR LEAARQMLER GRLTLDQIAL ETGFTDRRRM RETFLRAFGQ
PPQVIRRNAR AEVL
//
