ID J3IIU6_9PSED Unreviewed; 263 AA.
AC J3IIU6;
DT 03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 03-OCT-2012, sequence version 1.
DT 27-MAR-2024, entry version 51.
DE SubName: Full=Transcriptional regulator {ECO:0000313|EMBL:EJN27273.1};
GN ORFNames=PMI36_00663 {ECO:0000313|EMBL:EJN27273.1};
OS Pseudomonas sp. GM79.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
OC Pseudomonadaceae; Pseudomonas.
OX NCBI_TaxID=1144338 {ECO:0000313|EMBL:EJN27273.1, ECO:0000313|Proteomes:UP000007512};
RN [1] {ECO:0000313|EMBL:EJN27273.1, ECO:0000313|Proteomes:UP000007512}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=GM79 {ECO:0000313|EMBL:EJN27273.1,
RC ECO:0000313|Proteomes:UP000007512};
RX PubMed=23045501; DOI=10.1128/JB.01243-12;
RA Brown S.D., Utturkar S.M., Klingeman D.M., Johnson C.M., Martin S.L.,
RA Land M.L., Lu T.Y., Schadt C.W., Doktycz M.J., Pelletier D.A.;
RT "Twenty-one genome sequences from Pseudomonas species and 19 genome
RT sequences from diverse bacteria isolated from the rhizosphere and
RT endosphere of Populus deltoides.";
RL J. Bacteriol. 194:5991-5993(2012).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EJN27273.1}.
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DR EMBL; AKJE01000020; EJN27273.1; -; Genomic_DNA.
DR AlphaFoldDB; J3IIU6; -.
DR PATRIC; fig|1144338.3.peg.658; -.
DR Proteomes; UP000007512; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR CDD; cd07377; WHTH_GntR; 1.
DR Gene3D; 1.20.120.530; GntR ligand-binding domain-like; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR011711; GntR_C.
DR InterPro; IPR008920; TF_FadR/GntR_C.
DR InterPro; IPR000524; Tscrpt_reg_HTH_GntR.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR43537:SF5; GALACTONATE OPERON TRANSCRIPTIONAL REPRESSOR; 1.
DR PANTHER; PTHR43537; TRANSCRIPTIONAL REGULATOR, GNTR FAMILY; 1.
DR Pfam; PF07729; FCD; 1.
DR Pfam; PF00392; GntR; 1.
DR PRINTS; PR00035; HTHGNTR.
DR SMART; SM00895; FCD; 1.
DR SMART; SM00345; HTH_GNTR; 1.
DR SUPFAM; SSF48008; GntR ligand-binding domain-like; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS50949; HTH_GNTR; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 35..103
FT /note="HTH gntR-type"
FT /evidence="ECO:0000259|PROSITE:PS50949"
SQ SEQUENCE 263 AA; 29289 MW; 47E83AF27B52CCCD CRC64;
MLWRPSSPRL LSCAAPHLHR IAPFPMDYRK PSDRKSMHSR IVQELGMQIV SGRFKPDDKL
PAEALLCEEY AVSRPVLREA TRVLVAKGLV YSRPRVGTVV KPRKEWHMLD PDVLHWLMQS
SPQNEFFDLL TSVRSIIEPA AAALAAQFAT DEDIASIGEA YQRMEAAPTP EALLQPDLDF
HSRIADATHN DLLANLCNML SVAIAEALKH SNQRPNLHEL ALPRHKAILT AIENRDALGA
RHATLVQLDD ARSALSTVLG QVL
//
