ID J3IPH9_9PSED Unreviewed; 310 AA.
AC J3IPH9;
DT 03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 03-OCT-2012, sequence version 1.
DT 24-JAN-2024, entry version 51.
DE SubName: Full=DNA-binding domain-containing protein, AraC-type {ECO:0000313|EMBL:EJN32203.1};
GN ORFNames=PMI37_02277 {ECO:0000313|EMBL:EJN32203.1};
OS Pseudomonas sp. GM80.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
OC Pseudomonadaceae; Pseudomonas.
OX NCBI_TaxID=1144339 {ECO:0000313|EMBL:EJN32203.1, ECO:0000313|Proteomes:UP000007301};
RN [1] {ECO:0000313|EMBL:EJN32203.1, ECO:0000313|Proteomes:UP000007301}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=GM80 {ECO:0000313|EMBL:EJN32203.1,
RC ECO:0000313|Proteomes:UP000007301};
RX PubMed=23045501; DOI=10.1128/JB.01243-12;
RA Brown S.D., Utturkar S.M., Klingeman D.M., Johnson C.M., Martin S.L.,
RA Land M.L., Lu T.Y., Schadt C.W., Doktycz M.J., Pelletier D.A.;
RT "Twenty-one genome sequences from Pseudomonas species and 19 genome
RT sequences from diverse bacteria isolated from the rhizosphere and
RT endosphere of Populus deltoides.";
RL J. Bacteriol. 194:5991-5993(2012).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EJN32203.1}.
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DR EMBL; AKJD01000064; EJN32203.1; -; Genomic_DNA.
DR RefSeq; WP_008080742.1; NZ_AKJD01000064.1.
DR AlphaFoldDB; J3IPH9; -.
DR PATRIC; fig|1144339.3.peg.2128; -.
DR OrthoDB; 34150at2; -.
DR Proteomes; UP000007301; Unassembled WGS sequence.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0009893; P:positive regulation of metabolic process; IEA:UniProt.
DR Gene3D; 1.10.10.60; Homeodomain-like; 2.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR018060; HTH_AraC.
DR InterPro; IPR018062; HTH_AraC-typ_CS.
DR InterPro; IPR009594; Tscrpt_reg_HTH_AraC_N.
DR PANTHER; PTHR43436; ARAC-FAMILY TRANSCRIPTIONAL REGULATOR; 1.
DR PANTHER; PTHR43436:SF1; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF06719; AraC_N; 1.
DR Pfam; PF12833; HTH_18; 1.
DR SMART; SM00342; HTH_ARAC; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 2.
DR PROSITE; PS00041; HTH_ARAC_FAMILY_1; 1.
DR PROSITE; PS01124; HTH_ARAC_FAMILY_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000313|EMBL:EJN32203.1}.
FT DOMAIN 196..294
FT /note="HTH araC/xylS-type"
FT /evidence="ECO:0000259|PROSITE:PS01124"
SQ SEQUENCE 310 AA; 33940 MW; D3DDA5767540DC31 CRC64;
MIHISPRHES TLALNIDPRV NAPGDFATAI PGLSLFRRDQ PAPPAVCMIE PSLILVGRGE
KRLWVGGEGY SYDPSRFLVT SLDLPANSEV MLASPTQPCV GLVLKLDVSM LAEVITKSGL
PAKRQQSTGT GAGIGSLSSA LEGALDRLLA LLDEPEAIPV LAPLILREIH YRLLNTDQGA
RLRQITAVDG QGYRIAKAID WLKVNYTAAL RIDDLAARVQ MSAPTFHLHF RQLTGMSPLQ
YQKWMRLNEA RRLMLMERLD VSRAAFAVGY ESPSQFSREY GRLFGTAPSR DMALLRGQPL
EAEALGTATI
//
