ID J3KVA3_ORYBR Unreviewed; 1003 AA.
AC J3KVA3;
DT 03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 03-OCT-2012, sequence version 1.
DT 27-MAR-2024, entry version 40.
DE RecName: Full=Integrase catalytic domain-containing protein {ECO:0000259|PROSITE:PS50994};
OS Oryza brachyantha (malo sina).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=4533 {ECO:0000313|EnsemblPlants:OB0133G10020.1};
RN [1] {ECO:0000313|EnsemblPlants:OB0133G10020.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (JUN-2015) to UniProtKB.
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DR AlphaFoldDB; J3KVA3; -.
DR EnsemblPlants; OB0133G10020.1; OB0133G10020.1; OB0133G10020.
DR Gramene; OB0133G10020.1; OB0133G10020.1; OB0133G10020.
DR eggNOG; KOG0017; Eukaryota.
DR HOGENOM; CLU_299230_0_0_1; -.
DR OMA; RYNCHEP; -.
DR Proteomes; UP000006038; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR CDD; cd00303; retropepsin_like; 1.
DR Gene3D; 3.30.70.270; -; 2.
DR Gene3D; 2.40.70.10; Acid Proteases; 1.
DR Gene3D; 3.10.10.10; HIV Type 1 Reverse Transcriptase, subunit A, domain 1; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR043502; DNA/RNA_pol_sf.
DR InterPro; IPR001584; Integrase_cat-core.
DR InterPro; IPR021109; Peptidase_aspartic_dom_sf.
DR InterPro; IPR043128; Rev_trsase/Diguanyl_cyclase.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR PANTHER; PTHR45835:SF87; RNA-DIRECTED DNA POLYMERASE; 1.
DR PANTHER; PTHR45835; YALI0A06105P; 1.
DR Pfam; PF08284; RVP_2; 1.
DR SUPFAM; SSF50630; Acid proteases; 1.
DR SUPFAM; SSF56672; DNA/RNA polymerases; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50994; INTEGRASE; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000006038}.
FT DOMAIN 804..972
FT /note="Integrase catalytic"
FT /evidence="ECO:0000259|PROSITE:PS50994"
FT REGION 183..206
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 218..242
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 309..372
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 325..370
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1003 AA; 113636 MW; 581DB65B3724D016 CRC64;
MAMPINRRGL RLDGFVMELH YLHMTLGYSQ EVEYNGVPRS PFNEEGSPHS VWEVTAILLT
NTLDRVSLTA TAGGDTFESG AQNAALMVIG MLHHRCLIYL SSSPFHYHIR GGPREYADFR
TTRREDDTTI VHLARMVAAY DEARIDFQKL VRRGLVHNNG KILKLRKENL KLKQELDQMV
NTRRRDTGNR ENNQPPPPPP ENPTVAQIMP TQNQMMHGSY DATDAAPASQ HAESKPRSQP
ARCSTYHAVG IPSCPPPPML SEFLRVHPPT FSSTSNPSEA NDWLHAINKK LDVIQYFQTL
VDKTIHQEDK QNQIESKKRR LAQARASQGP SQRMRYVVSP SSGSSSSTPR APRPNFNIIK
TQNQGGNGAQ RQAPIAAHGG SVCRDGLGKI LVRYNCHEPG HFADKCLKPH CQQGSAPTRP
FNSNTVANTQ GNNNNNNKVV RGRVNHISAE EAEAAPDIIL STFLVNSIPA TVLFYSGDSH
SFISRSFVWK HKLRVENLSN PMMISTPGSQ MSCNLFSPSV SIEIQGISFL ANPILLNSKN
LDVILRMDWL TKNSRQQVIF QAKVALTKES LLNQTTLEEI PVVKEYPDVF PEDLPGMPPN
RDIEFRIDLV PGTTPISKRP YRMAANELAE VKKQLEELRE KGYIRPSTSP WGVPIIFVEK
KDKTKMMCVD YRALNETKEE HEGHLRLVLN KLREHQLYAK FSKCDFWLSE VKFLGHVISA
QGVAVDPTNV EAVSNWTAPK SVTQVCSFLG LAGYYRRTQE THSIRCPREP ILNPARQHED
VLGPESQILR VKGEHQRPAW LLQPLKIPEW KWEDSRMEDS RMDFIIGLPR TQSGYDSIWV
IIDRLTKVAH FIPVNSTYRG SKLAELYFAK ILCLHGVPKK IVSNRGSQFT SKFWQKVQEE
MGTRLNFSTI YHPSIDGQTE RVNQILEDML RACTLDFGKS WDKNLPYAEF SYNNSYQASL
QMASFEALYG RKCRTPLLWD QTGERQVFGT DILREAEEKV KII
//
