ID J3L6D8_ORYBR Unreviewed; 716 AA.
AC J3L6D8;
DT 03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 03-OCT-2012, sequence version 1.
DT 27-MAR-2024, entry version 45.
DE RecName: Full=Zinc finger PHD-type domain-containing protein {ECO:0000259|SMART:SM00249};
GN Name=102716460 {ECO:0000313|EnsemblPlants:OB01G47940.1};
OS Oryza brachyantha (malo sina).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=4533 {ECO:0000313|EnsemblPlants:OB01G47940.1};
RN [1] {ECO:0000313|EnsemblPlants:OB01G47940.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IRGC 101232 {ECO:0000313|EnsemblPlants:OB01G47940.1};
RX PubMed=23481403;
RA Chen J., Huang Q., Gao D., Wang J., Lang Y., Liu T., Li B., Bai Z.,
RA Luis Goicoechea J., Liang C., Chen C., Zhang W., Sun S., Liao Y., Zhang X.,
RA Yang L., Song C., Wang M., Shi J., Liu G., Liu J., Zhou H., Zhou W., Yu Q.,
RA An N., Chen Y., Cai Q., Wang B., Liu B., Min J., Huang Y., Wu H., Li Z.,
RA Zhang Y., Yin Y., Song W., Jiang J., Jackson S.A., Wing R.A., Wang J.,
RA Chen M.;
RT "Whole-genome sequencing of Oryza brachyantha reveals mechanisms underlying
RT Oryza genome evolution.";
RL Nat. Commun. 4:1595-1595(2013).
RN [2] {ECO:0000313|EnsemblPlants:OB01G47940.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (APR-2013) to UniProtKB.
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DR RefSeq; XP_006645112.1; XM_006645049.2.
DR AlphaFoldDB; J3L6D8; -.
DR STRING; 4533.J3L6D8; -.
DR EnsemblPlants; OB01G47940.1; OB01G47940.1; OB01G47940.
DR GeneID; 102716460; -.
DR Gramene; OB01G47940.1; OB01G47940.1; OB01G47940.
DR KEGG; obr:102716460; -.
DR eggNOG; KOG1844; Eukaryota.
DR HOGENOM; CLU_012141_0_0_1; -.
DR OMA; RCFGINE; -.
DR OrthoDB; 455444at2759; -.
DR Proteomes; UP000006038; Chromosome 1.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR CDD; cd15556; PHD_MMD1_like; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR019786; Zinc_finger_PHD-type_CS.
DR InterPro; IPR011011; Znf_FYVE_PHD.
DR InterPro; IPR001965; Znf_PHD.
DR InterPro; IPR019787; Znf_PHD-finger.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR46201:SF3; OS01G0877500 PROTEIN; 1.
DR PANTHER; PTHR46201; PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED; 1.
DR Pfam; PF00628; PHD; 1.
DR SMART; SM00249; PHD; 1.
DR SUPFAM; SSF57903; FYVE/PHD zinc finger; 1.
DR PROSITE; PS01359; ZF_PHD_1; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000006038};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771}.
FT DOMAIN 622..668
FT /note="Zinc finger PHD-type"
FT /evidence="ECO:0000259|SMART:SM00249"
SQ SEQUENCE 716 AA; 79306 MW; BA5B8945755134D2 CRC64;
MVVNSRPLKR ARTRVEARDF EGFPPAGDGG AAGTFREAVR GFLARYARLL PLPSIFSPAA
AAAPPHLLTW RVSLRVGEEG DEEGGGAAVE LNVVEEDVLR SRSVYCDQCR VVGWSGHPVC
GKRYHFIIEN DNSQVCGRRH SCCLRCGTPT VAGESRCLLC NFDMEGEELE ECGYLHLDDN
THLLHAVVHA NGYGHLLRVN GREGGSKCLT GRDIMSFWDR LCKVLHTRKV TVMDISKKHG
MEYRLLHAIT SGHPWYGEWG YKFGAGSFGL SSDTYQEAVD MLSSIQLSLY FSHRQPIRTP
LQNTIALYWA LADRQLVTVR DLFRFIMHLL HQARKNEISK PTTDEHKEVA SNVLCKWTKD
DVDRAEAAML KVLRAVQTGQ WVSWRALRGA SSKAVDSQEL LDSSLRGLGG KLMDDGHIIA
VRCNAETSAI EYRLEDYSSQ SPVNTTVFGP SVDHLLHDLK FLYNALLNPE IMLSSQPEVI
AASSHSAAAK ILDCKQFIKH YDEHTPRAPL NPFLLSVRCS IELLDHPKDY TAPPVELVLL
PASATLAELK IQATRAFQET YLMFQSFQVE QLPDFPNFSD TTLVKHVLGS NQLVRVRGRC
TGDNRRIVQF RMERGLENWT VDCTCGAKDD DGERMMACDV CGVWQHTRCS GISDLDDVPE
KFICRKCASP RRGKGHGGGG GNGGSRMDVS AAGRCKDEIG SSVGGAGKFG HMATVG
//
