ID J3L9W8_ORYBR Unreviewed; 622 AA.
AC J3L9W8;
DT 03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 03-OCT-2012, sequence version 1.
DT 27-MAR-2024, entry version 45.
DE RecName: Full=Pentatricopeptide repeat-containing protein {ECO:0008006|Google:ProtNLM};
OS Oryza brachyantha (malo sina).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=4533 {ECO:0000313|EnsemblPlants:OB02G14350.1};
RN [1] {ECO:0000313|EnsemblPlants:OB02G14350.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IRGC 101232 {ECO:0000313|EnsemblPlants:OB02G14350.1};
RX PubMed=23481403;
RA Chen J., Huang Q., Gao D., Wang J., Lang Y., Liu T., Li B., Bai Z.,
RA Luis Goicoechea J., Liang C., Chen C., Zhang W., Sun S., Liao Y., Zhang X.,
RA Yang L., Song C., Wang M., Shi J., Liu G., Liu J., Zhou H., Zhou W., Yu Q.,
RA An N., Chen Y., Cai Q., Wang B., Liu B., Min J., Huang Y., Wu H., Li Z.,
RA Zhang Y., Yin Y., Song W., Jiang J., Jackson S.A., Wing R.A., Wang J.,
RA Chen M.;
RT "Whole-genome sequencing of Oryza brachyantha reveals mechanisms underlying
RT Oryza genome evolution.";
RL Nat. Commun. 4:1595-1595(2013).
RN [2] {ECO:0000313|EnsemblPlants:OB02G14350.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (APR-2013) to UniProtKB.
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DR AlphaFoldDB; J3L9W8; -.
DR EnsemblPlants; OB02G14350.1; OB02G14350.1; OB02G14350.
DR Gramene; OB02G14350.1; OB02G14350.1; OB02G14350.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_15_10_1; -.
DR OMA; SCRIHAN; -.
DR Proteomes; UP000006038; Chromosome 2.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 6.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 7.
DR PANTHER; PTHR47924:SF204; DYW_DEAMINASE DOMAIN-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR47924; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF01535; PPR; 2.
DR Pfam; PF13041; PPR_2; 5.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS51375; PPR; 6.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000006038};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transit peptide {ECO:0000256|ARBA:ARBA00022946}.
FT REPEAT 22..56
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 131..165
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 197..231
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 298..332
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 399..433
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 434..464
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ SEQUENCE 622 AA; 68448 MW; 24A5C13E821CBFA5 CRC64;
MYTKCGRVGD AVRLFDGMAR PNEVSFTAMM GGLAQAGSVD EALRLFARMC RSGVPVDPVS
VSSVLGACAQ ACSSDYSSAR AFRLGQAIHA LVVTKGFGSD QHVGNSLIDM YAKCMEMDEA
VKVFESLPNV TVVSWNILIT GFGQEGSCVK AMELLKRMQE AGFEPNEVTY CNLLASCIKA
RDVISARAMF EKISSPSVTT WNTLLSGYCQ EEQHQDTIEL FRRMQHQNVQ PDRTTLAVIL
SSCSRLGNLD LGRQVHSASV RLLLHNDIFV ASGLVDMYSK CGQIGIARSI FNKMTERDVV
CWNSIISGLA IHSLNKEAFD FFKQMRENGI MPTESSYASM VNSCARLSSI PQGRQIHAQV
LKDGYDQNVY VGSALIDMYA KCGNMDDAHL FFDCMMMKNI VAWNEMIHGY AQNGFGDKAV
ELFEYMLTTE QKPDTVTFIA VLTGCSHSGL VDKAMAFFNS MENGYGIIPL AEHYTCLIDA
LGRAGRFVEV EALIRKMPCK DDPIIWEVLL AACVVHHNAE LGKCAAEHLF RIDPKNPSPY
VLLSNIYASL GRHSDASAVR ALMSNRGVVK GRGYSWIDQK DGVHAFMVAD DLGTDGGEFI
MFSNEENISG TTKVHQDEIC VS
//
