ID J3M313_ORYBR Unreviewed; 1029 AA.
AC J3M313;
DT 03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 03-OCT-2012, sequence version 1.
DT 27-MAR-2024, entry version 40.
DE RecName: Full=Protein CHROMATIN REMODELING 24 {ECO:0008006|Google:ProtNLM};
OS Oryza brachyantha (malo sina).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=4533 {ECO:0000313|EnsemblPlants:OB04G37880.1};
RN [1] {ECO:0000313|EnsemblPlants:OB04G37880.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IRGC 101232 {ECO:0000313|EnsemblPlants:OB04G37880.1};
RX PubMed=23481403;
RA Chen J., Huang Q., Gao D., Wang J., Lang Y., Liu T., Li B., Bai Z.,
RA Luis Goicoechea J., Liang C., Chen C., Zhang W., Sun S., Liao Y., Zhang X.,
RA Yang L., Song C., Wang M., Shi J., Liu G., Liu J., Zhou H., Zhou W., Yu Q.,
RA An N., Chen Y., Cai Q., Wang B., Liu B., Min J., Huang Y., Wu H., Li Z.,
RA Zhang Y., Yin Y., Song W., Jiang J., Jackson S.A., Wing R.A., Wang J.,
RA Chen M.;
RT "Whole-genome sequencing of Oryza brachyantha reveals mechanisms underlying
RT Oryza genome evolution.";
RL Nat. Commun. 4:1595-1595(2013).
RN [2] {ECO:0000313|EnsemblPlants:OB04G37880.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (APR-2013) to UniProtKB.
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DR STRING; 4533.J3M313; -.
DR EnsemblPlants; OB04G37880.1; OB04G37880.1; OB04G37880.
DR Gramene; OB04G37880.1; OB04G37880.1; OB04G37880.
DR eggNOG; KOG0387; Eukaryota.
DR HOGENOM; CLU_000315_17_0_1; -.
DR Proteomes; UP000006038; Chromosome 4.
DR GO; GO:0005694; C:chromosome; IEA:EnsemblPlants.
DR GO; GO:0005737; C:cytoplasm; IEA:EnsemblPlants.
DR GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR GO; GO:0140658; F:ATP-dependent chromatin remodeler activity; IEA:InterPro.
DR GO; GO:2000014; P:regulation of endosperm development; IEA:EnsemblPlants.
DR GO; GO:0010965; P:regulation of mitotic sister chromatid separation; IEA:EnsemblPlants.
DR CDD; cd18793; SF2_C_SNF; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 3.40.50.10810; Tandem AAA-ATPase domain; 1.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR038718; SNF2-like_sf.
DR InterPro; IPR049730; SNF2/RAD54-like_C.
DR InterPro; IPR000330; SNF2_N.
DR PANTHER; PTHR45629:SF7; DNA EXCISION REPAIR PROTEIN ERCC-6-RELATED; 1.
DR PANTHER; PTHR45629; SNF2/RAD54 FAMILY MEMBER; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF00176; SNF2-rel_dom; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 2.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Helicase {ECO:0000256|ARBA:ARBA00022806};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000006038}.
FT DOMAIN 332..506
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 684..839
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT REGION 1..38
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 65..103
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 16..30
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 74..101
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1029 AA; 114975 MW; DBC3BAC32814C434 CRC64;
MASPPPFDIC GDLDDDPTPP APPLPAPPPH XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
XXXXXXXXXX XXPPARYPNP PPPLSLLLSS LTPPPSQEPE PAKVKLPGRR RLCKLSSAPD
DSADSIRDIL DDLTTRLDSL SVDRPTARLR PQVTPLPCAI ADDADADPEA DHKGKTPILG
SYVVNDGRKP SPLVYCEDDD DEDFATRSYG GVKEEVTSKV FKASSSFGGR GNDCKMKAKG
AYAFDTVSRE TVSKASVFGA YDGDEDIDQD AGNGKENRVI VENSAEDVDW EKTEDFKMEP
TGTGVTHKPY KLPGRIFNML YPHQREGLRW LWVLHCRGTG GILGDDMGLG KTMQVSAFLA
GLFHSRLIKR VLVVAPKTLL THWIKELSVV GLKDKIRDYS CPNANVRNYE LKYAFKEGGI
LLTTYDIVRN NYKAIKGNFS HDTDDEEETI WNYVILDEGH IIKNPKTQRA QSLFEIPCIH
RVVISGTPIQ NNLKEMWALF YFCCPEVLGD KEEFKARYEL AILRGNDKNA TNREKHIGSN
VAKELRERIK PYFLRRMKSE VFLDSGTTED KKLAKKNELI IWLKLTSCQR QLYEAFLNSE
LVHSSMQGSP LAAITILKKI CDHPLLLTKR AAEGVLEGMD AMLNNQEMGM VEKMAMNLAD
MADDDDELQV GQDVSCKLSF MMSLLRNLID EGHTVLIFSQ TRKMLNLIQE AIILEGYKFL
RIDGTTKISE RERIVKDFQE GPGAPIFLLT TQVGGLGLTL TKAARVIVVD PAWNPSTDNQ
SVDRAYRIGQ TKDVIVYRLM TSGTIEEKIY KLQVFKGALF RTATEHKEQT RYFSKRDIQE
LFSLPEQGFD VSLTQKQLQE EHGQQLVMDE SLRKHIQFLE QQGIAGVSHH SLLFSKTAIL
PTLNENDAFD SNPRAMPMAK HYYKGASSDY VANGAAYAMK PKDFTARTYS PNSTTTESPE
EIKAKINRLS QTLANTGLVA RLPDRGDKIR RQINELDEKL TVIESSPVPS SSPLETGPAE
VICLDDLSV
//
