ID J3M7L6_ORYBR Unreviewed; 327 AA.
AC J3M7L6;
DT 03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 03-OCT-2012, sequence version 1.
DT 27-MAR-2024, entry version 41.
DE RecName: Full=Histone deacetylase domain-containing protein {ECO:0000259|Pfam:PF00850};
OS Oryza brachyantha (malo sina).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=4533 {ECO:0000313|EnsemblPlants:OB05G25900.1};
RN [1] {ECO:0000313|EnsemblPlants:OB05G25900.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IRGC 101232 {ECO:0000313|EnsemblPlants:OB05G25900.1};
RX PubMed=23481403;
RA Chen J., Huang Q., Gao D., Wang J., Lang Y., Liu T., Li B., Bai Z.,
RA Luis Goicoechea J., Liang C., Chen C., Zhang W., Sun S., Liao Y., Zhang X.,
RA Yang L., Song C., Wang M., Shi J., Liu G., Liu J., Zhou H., Zhou W., Yu Q.,
RA An N., Chen Y., Cai Q., Wang B., Liu B., Min J., Huang Y., Wu H., Li Z.,
RA Zhang Y., Yin Y., Song W., Jiang J., Jackson S.A., Wing R.A., Wang J.,
RA Chen M.;
RT "Whole-genome sequencing of Oryza brachyantha reveals mechanisms underlying
RT Oryza genome evolution.";
RL Nat. Commun. 4:1595-1595(2013).
RN [2] {ECO:0000313|EnsemblPlants:OB05G25900.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (APR-2013) to UniProtKB.
CC -!- COFACTOR:
CC Name=Zn(2+); Xref=ChEBI:CHEBI:29105;
CC Evidence={ECO:0000256|ARBA:ARBA00001947};
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DR AlphaFoldDB; J3M7L6; -.
DR STRING; 4533.J3M7L6; -.
DR EnsemblPlants; OB05G25900.1; OB05G25900.1; OB05G25900.
DR Gramene; OB05G25900.1; OB05G25900.1; OB05G25900.
DR eggNOG; KOG1343; Eukaryota.
DR HOGENOM; CLU_007727_8_2_1; -.
DR Proteomes; UP000006038; Chromosome 5.
DR GO; GO:0004407; F:histone deacetylase activity; IEA:UniProtKB-EC.
DR CDD; cd09996; HDAC_classII_1; 1.
DR Gene3D; 3.40.800.20; Histone deacetylase domain; 1.
DR InterPro; IPR000286; His_deacetylse.
DR InterPro; IPR023801; His_deacetylse_dom.
DR InterPro; IPR037138; His_deacetylse_dom_sf.
DR InterPro; IPR023696; Ureohydrolase_dom_sf.
DR PANTHER; PTHR10625:SF9; HISTONE DEACETYLASE 8; 1.
DR PANTHER; PTHR10625; HISTONE DEACETYLASE HDAC1-RELATED; 1.
DR Pfam; PF00850; Hist_deacetyl; 1.
DR PRINTS; PR01270; HDASUPER.
DR SUPFAM; SSF52768; Arginase/deacetylase; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000006038}.
FT DOMAIN 10..282
FT /note="Histone deacetylase"
FT /evidence="ECO:0000259|Pfam:PF00850"
SQ SEQUENCE 327 AA; 35350 MW; 4F788052126B9B85 CRC64;
MVSILRRGPI ARFLSWHSGR PAHVAELLSF HSAGYIEELV QANAGGAKKL CEGTFLNPGS
WGAALLAAGT TLSAMKHILD GHGKIAYALV RPPGHHAQPD RADGYCFLNN AGLAVKLALD
SGRRKVAVVD IDVHYGNGTA EGFYHTDSVL TISLHMKHGS WGPSHPQSGS VDEIGEGSGL
GYNLNIPLPN GAGDAGYEYA MNELVVPGIE KFQPELLVFV VGQDSSAFDP NGRQCLTMVG
YRKIGQIMRG LADRHSNGQI LVVQEGGYHI SYSAYCLHAT LEGVLNLQAP LLDDPIAYYP
EDENYTMKVV DIIKQCWKES IPFLKDI
//
