ID J3MTA4_ORYBR Unreviewed; 595 AA.
AC J3MTA4;
DT 03-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 03-OCT-2012, sequence version 1.
DT 08-NOV-2023, entry version 46.
DE RecName: Full=DYW domain-containing protein {ECO:0000259|Pfam:PF14432};
GN Name=102715962 {ECO:0000313|EnsemblPlants:OB08G23340.1};
OS Oryza brachyantha (malo sina).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=4533 {ECO:0000313|EnsemblPlants:OB08G23340.1};
RN [1] {ECO:0000313|EnsemblPlants:OB08G23340.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=IRGC 101232 {ECO:0000313|EnsemblPlants:OB08G23340.1};
RX PubMed=23481403;
RA Chen J., Huang Q., Gao D., Wang J., Lang Y., Liu T., Li B., Bai Z.,
RA Luis Goicoechea J., Liang C., Chen C., Zhang W., Sun S., Liao Y., Zhang X.,
RA Yang L., Song C., Wang M., Shi J., Liu G., Liu J., Zhou H., Zhou W., Yu Q.,
RA An N., Chen Y., Cai Q., Wang B., Liu B., Min J., Huang Y., Wu H., Li Z.,
RA Zhang Y., Yin Y., Song W., Jiang J., Jackson S.A., Wing R.A., Wang J.,
RA Chen M.;
RT "Whole-genome sequencing of Oryza brachyantha reveals mechanisms underlying
RT Oryza genome evolution.";
RL Nat. Commun. 4:1595-1595(2013).
RN [2] {ECO:0000313|EnsemblPlants:OB08G23340.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (APR-2013) to UniProtKB.
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DR RefSeq; XP_006659434.1; XM_006659371.2.
DR RefSeq; XP_015695869.1; XM_015840383.1.
DR AlphaFoldDB; J3MTA4; -.
DR EnsemblPlants; OB08G23340.1; OB08G23340.1; OB08G23340.
DR GeneID; 102715962; -.
DR Gramene; OB08G23340.1; OB08G23340.1; OB08G23340.
DR KEGG; obr:102715962; -.
DR eggNOG; KOG4197; Eukaryota.
DR HOGENOM; CLU_002706_37_6_1; -.
DR OMA; YSSAGNW; -.
DR OrthoDB; 456150at2759; -.
DR Proteomes; UP000006038; Chromosome 8.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0008270; F:zinc ion binding; IEA:InterPro.
DR GO; GO:0009451; P:RNA modification; IEA:InterPro.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 2.
DR InterPro; IPR032867; DYW_dom.
DR InterPro; IPR046848; E_motif.
DR InterPro; IPR002885; Pentatricopeptide_rpt.
DR InterPro; IPR046960; PPR_At4g14850-like_plant.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR NCBIfam; TIGR00756; PPR; 3.
DR PANTHER; PTHR47926; PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN; 1.
DR PANTHER; PTHR47926:SF339; UMP-CMP KINASE; 1.
DR Pfam; PF14432; DYW_deaminase; 1.
DR Pfam; PF20431; E_motif; 1.
DR Pfam; PF01535; PPR; 2.
DR Pfam; PF13041; PPR_2; 2.
DR PROSITE; PS51375; PPR; 2.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000006038};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Transit peptide {ECO:0000256|ARBA:ARBA00022946}.
FT REPEAT 184..214
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT REPEAT 287..321
FT /note="PPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
FT DOMAIN 503..595
FT /note="DYW"
FT /evidence="ECO:0000259|Pfam:PF14432"
SQ SEQUENCE 595 AA; 65660 MW; 3A27F7BCD7DEB3E0 CRC64;
MASHLARALR PSTPSSTTSA AAALLSSTSP LPAARFLQLH AHVLRTGGLL LLRAPPASAS
AFLSLAAASL PSPRALSVLL HHITQESLPS TFCCNTILGS LREPDAVRFL RRVRALGRRG
NAFSLSIVLK HCRTIGHASQ LHANVVVEGH VRDALLATSL MRAYAACGDG DAARKMFDEM
PVKDTVAWNV LITCYTKNRR TKDALKIFDE MRSGENGTEP DDVTCILLLQ ACTSLGALDF
GEQVWDYAQD HGYGGELKVR NSLITMYTKC GCMEKAYQVF SGTPNKSVVT WSAMISGLAA
NGFGKDAISA FEEMGRSGIA PDEQTFTGVL SACSHSGLVD EGFKFFDIMC HEYQLMPNVH
HYGCMVDLMG RAGLLNQAYE LVVREMRVAP DATIWRTLLG ACRVHGHVDL GERVINHLIE
LKAQQAGDYV LLLNTYAAAE DWKNVAVVRK LMKEKGIQTT PGCTTVEMNG EIHEFIADDD
SHPRKAEIYE KLNEINKHLR IAGYVPNMLS ELHDLDSEGK ECALAYHSEK LAIAFALLVT
PQHRPIRLAK NLRVCVDCHN FTKVFSGVYN RLVIVRDRTR FHHFKGFQCS CNDYW
//