ID J5UFK4_9FIRM Unreviewed; 513 AA.
AC J5UFK4;
DT 31-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 31-OCT-2012, sequence version 1.
DT 27-MAR-2024, entry version 48.
DE SubName: Full=Sigma-54 interaction domain protein {ECO:0000313|EMBL:EJU22124.1};
GN ORFNames=HMPREF1143_0749 {ECO:0000313|EMBL:EJU22124.1};
OS Peptoanaerobacter stomatis.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Peptostreptococcaceae;
OC Peptoanaerobacter.
OX NCBI_TaxID=796937 {ECO:0000313|EMBL:EJU22124.1, ECO:0000313|Proteomes:UP000005244};
RN [1] {ECO:0000313|EMBL:EJU22124.1, ECO:0000313|Proteomes:UP000005244}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=OBRC8 {ECO:0000313|EMBL:EJU22124.1,
RC ECO:0000313|Proteomes:UP000005244};
RA Durkin A.S., McCorrison J., Torralba M., Gillis M., Methe B., Sutton G.,
RA Nelson K.E.;
RL Submitted (JUL-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EJU22124.1}.
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DR EMBL; ALNK01000023; EJU22124.1; -; Genomic_DNA.
DR RefSeq; WP_009531104.1; NZ_ALNK01000023.1.
DR AlphaFoldDB; J5UFK4; -.
DR PATRIC; fig|796941.3.peg.1289; -.
DR Proteomes; UP000005244; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 3.30.70.260; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 3.30.450.20; PAS domain; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR030828; HTH_TypR.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR002078; Sigma_54_int.
DR InterPro; IPR025662; Sigma_54_int_dom_ATP-bd_1.
DR InterPro; IPR025943; Sigma_54_int_dom_ATP-bd_2.
DR PANTHER; PTHR32071:SF57; SIGMA L-DEPENDENT TRANSCRIPTIONAL REGULATOR YQIR-RELATED; 1.
DR PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF18024; HTH_50; 1.
DR Pfam; PF00158; Sigma54_activat; 1.
DR SMART; SM00382; AAA; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS00675; SIGMA54_INTERACT_1; 1.
DR PROSITE; PS00676; SIGMA54_INTERACT_2; 1.
DR PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000005244};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 200..430
FT /note="Sigma-54 factor interaction"
FT /evidence="ECO:0000259|PROSITE:PS50045"
SQ SEQUENCE 513 AA; 59445 MW; 54332AF0518E4960 CRC64;
MDIKRIKIMF YINRPHLTYD ILTVFKKHDI PIISMEVYSN VIYLKIPFIS DDLTEEIRVE
CEKVYGYDYM EEIDVMSFEE KDIGLKSVLN LISEGVIILD SKGVIEYGNK VSFDFIENVR
TGHLIFDFID DKDLKNCIKS DKKSSVDFIK NKNIQIKNKN FLLNMNPLYS EEGIFCGYLL
TLKEIKEDLF YDSVITFDDI MGDDRKFRQI IETAKHYSHS DASILLTGES GTGKEMFARA
IHSESKRSKM PFVSINCAAI PDELLESELF GYTAGSFTGA NKSGKIGIFE MAEGGTVFLD
EIGELNYHLQ AKLLRVLQEK KIRPIGSAKE KDMNVRIISA TNRNLEKLIN EGSFRMDLFY
RLNIFRIQLP PLRQRQDDIP KLTNYFLKIL STRYDKQNIS LSNDAESTLI SYSWPGNIRE
MQNVLERAVV LTSNNTIKKE HIIFDKTKGF ENISIEENDF GTTVSKFERE LILKYLRKYK
SIRNTAKNIG VTHTLLINRI KKYNIEDDEW KNS
//
