ID J5W314_9FLAO Unreviewed; 1088 AA.
AC J5W314;
DT 31-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 31-OCT-2012, sequence version 1.
DT 24-JAN-2024, entry version 37.
DE SubName: Full=Type I site-specific deoxyribonuclease {ECO:0000313|EMBL:EJU34939.1};
GN ORFNames=HMPREF1154_1015 {ECO:0000313|EMBL:EJU34939.1};
OS Capnocytophaga sp. CM59.
OC Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales;
OC Flavobacteriaceae; Capnocytophaga.
OX NCBI_TaxID=936370 {ECO:0000313|EMBL:EJU34939.1, ECO:0000313|Proteomes:UP000003140};
RN [1] {ECO:0000313|EMBL:EJU34939.1, ECO:0000313|Proteomes:UP000003140}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CM59 {ECO:0000313|EMBL:EJU34939.1,
RC ECO:0000313|Proteomes:UP000003140};
RA Durkin A.S., McCorrison J., Torralba M., Gillis M., Methe B., Sutton G.,
RA Nelson K.E.;
RL Submitted (JUL-2012) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EJU34939.1}.
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DR EMBL; ALNN01000002; EJU34939.1; -; Genomic_DNA.
DR RefSeq; WP_009640487.1; NZ_ALNN01000002.1.
DR AlphaFoldDB; J5W314; -.
DR PATRIC; fig|936370.3.peg.20; -.
DR Proteomes; UP000003140; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0009035; F:type I site-specific deoxyribonuclease activity; IEA:UniProtKB-EC.
DR GO; GO:0009307; P:DNA restriction-modification system; IEA:UniProtKB-KW.
DR CDD; cd18032; DEXHc_RE_I_III_res; 1.
DR CDD; cd18799; SF2_C_EcoAI-like; 1.
DR Gene3D; 3.90.1570.30; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR025285; DUF4145.
DR InterPro; IPR013670; EcoEI_R_C_dom.
DR InterPro; IPR006935; Helicase/UvrB_N.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR PANTHER; PTHR47396:SF1; ATP-DEPENDENT HELICASE IRC3-RELATED; 1.
DR PANTHER; PTHR47396; TYPE I RESTRICTION ENZYME ECOKI R PROTEIN; 1.
DR Pfam; PF13643; DUF4145; 1.
DR Pfam; PF08463; EcoEI_R_C; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF04851; ResIII; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils}.
FT DOMAIN 397..581
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 658..833
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT COILED 143..170
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 1088 AA; 124971 MW; 6DE910163844C342 CRC64;
MRSNFEFLKD IEPLLLYRIA YLAETYLYTD PNGCLMKLRQ FAEVMVNEVF QIEHIALPYD
NNQANRISVL KREGIIEHQL GSILNQLRQR GNEAVHAGFD SVSSAKTNLQ MAYHLAQWYA
LSYGEGTGGH TFVMPKEEDI PNVADLQAEK EAQEQQIKAL TEQLIELQKQ QSYWEAAQTK
EFINAQKERA RRTLQYAKDL QLSEAETRKL IDAQLCEAGW QADTELLRYS KGTRPQKGKN
LAIAEWPTDK GFADYALFAG LQLVGIVEAK AKHKDISSIL SNQCKDYATH IKKEHACYLI
GTWGDYQVPF LFSTNGRRYL KQIETKSGIW FLDVRREENI PKALQHWKSP QGLLEDLAQD
IERATQSLAQ TPYDLLRDPN GLNLRPYQIR AVEATEKALA EARRSVLLSM ATGTGKTRTL
LAMIYRFLAA KRFKRILFLV DRNVLGKQAL DVFKDVKLED LQTLYNIYPI NSLSEKTIEK
ETKIQLSTVQ AMVRRILYNE GEQMPTVSDY DLVIVDEAHR GYILDKEMSE DEFAFRDQDD
FTSKYTMVID YFDAVKIAVT ATPALHTTQL FGKPVFEYSY REAVLDGFLV DYNLPHHIFT
QQRIEGIHFA KGETVQVYDA EKNEVIDLSE IPDELNFEVE QFNRNIIVEG FNRAVLEEIS
QFLDPTGEGK TLIFAVDDAH ADLVVKILKE IYAEQGVDND AIQKITGSIG DKKRVEEAVH
KFKNDTYPNI VVTVDLLTTG VDVPEITALV FLRFVRSRIL FHQMIGRATR LCPKINKEYF
DVYDPVGVFD FFTEVSEMSP IVVNPSTTLE DIINGFEHTE DPELIAKYTQ QLLGRLQRRA
KNISQQDFDY FCSLSQGVSP KDFLTSLKNT PSEEVKSFVR ENIKAIACLF HSQAKTVKYK
YISDKPDEVC EHYVGYGKTE KRPGDYIEQF SAYIAENRNK LTALNLLCTR PSELTRSDLK
RLYLEMAQEG YTLKELNKAW NNAKNVEITA DLIGMIRTLA LGNALVDYKI RLDNAFEKLK
QTHSFNAMET KWLDRIKTFL EKEQYIEKAD FDTGAFQNAG GYEKINKVFK NHLGEIVDEL
KEYLFMER
//