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Database: UniProt
Entry: J6EDG8_SACK1
LinkDB: J6EDG8_SACK1
Original site: J6EDG8_SACK1 
ID   J6EDG8_SACK1            Unreviewed;       418 AA.
AC   J6EDG8;
DT   31-OCT-2012, integrated into UniProtKB/TrEMBL.
DT   31-OCT-2012, sequence version 1.
DT   24-JAN-2024, entry version 35.
DE   SubName: Full=RPN14-like protein {ECO:0000313|EMBL:EJT41727.1};
GN   Name=YGL004C {ECO:0000313|EMBL:EJT41727.1};
GN   Synonyms=SKDI07G2510 {ECO:0000313|EMBL:CAI4062034.1};
GN   ORFNames=SKDI_07G2510 {ECO:0000313|EMBL:CAI4062034.1}, SKUD_188104
GN   {ECO:0000313|EMBL:EJT41727.1};
OS   Saccharomyces kudriavzevii (strain ATCC MYA-4449 / AS 2.2408 / CBS 8840 /
OS   NBRC 1802 / NCYC 2889) (Yeast).
OC   Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes;
OC   Saccharomycetales; Saccharomycetaceae; Saccharomyces.
OX   NCBI_TaxID=226230 {ECO:0000313|EMBL:EJT41727.1, ECO:0000313|Proteomes:UP000002753};
RN   [1] {ECO:0000313|EMBL:EJT41727.1, ECO:0000313|Proteomes:UP000002753}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC MYA-4449 / AS 2.2408 / CBS 8840 / NBRC 1802 / NCYC 2889
RC   {ECO:0000313|Proteomes:UP000002753}, and IFO 1802
RC   {ECO:0000313|EMBL:EJT41727.1};
RX   PubMed=12775844; DOI=10.1126/science.1084337;
RA   Cliften P.F., Sudarsanam P., Desikan A., Fulton L., Fulton B., Majors J.,
RA   Waterston R., Cohen B.A., Johnston M.;
RT   "Finding functional features in Saccharomyces genomes by phylogenetic
RT   footprinting.";
RL   Science 301:71-76(2003).
RN   [2] {ECO:0000313|EMBL:EJT41727.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=IFO 1802 {ECO:0000313|EMBL:EJT41727.1};
RA   Cliften P.F., Johnston M.;
RL   Submitted (APR-2003) to the EMBL/GenBank/DDBJ databases.
RN   [3] {ECO:0000313|Proteomes:UP000002753}
RP   GENOME REANNOTATION.
RC   STRAIN=ATCC MYA-4449 / AS 2.2408 / CBS 8840 / NBRC 1802 / NCYC 2889
RC   {ECO:0000313|Proteomes:UP000002753};
RX   PubMed=22384314; DOI=10.1534/g3.111.000273;
RA   Scannell D.R., Zill O.A., Rokas A., Payen C., Dunham M.J., Eisen M.B.,
RA   Rine J., Johnston M., Hittinger C.T.;
RT   "The awesome power of yeast evolutionary genetics: New genome sequences and
RT   strain resources for the Saccharomyces sensu stricto genus.";
RL   G3 (Bethesda) 1:11-25(2011).
RN   [4] {ECO:0000313|EMBL:EJT41727.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=IFO 1802 {ECO:0000313|EMBL:EJT41727.1};
RA   Cliften P., Hittinger C.T., Wang B., Sudarsanam P., Desikan A., Fulton L.,
RA   Fulton B., Majors J., Waterston R., Cohen B.A., Johnston M.;
RL   Submitted (AUG-2012) to the EMBL/GenBank/DDBJ databases.
RN   [5] {ECO:0000313|EMBL:CAI4062034.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=IFO1802 {ECO:0000313|EMBL:CAI4062034.1};
RA   Byrne P K.;
RL   Submitted (OCT-2022) to the EMBL/GenBank/DDBJ databases.
CC   -!- SIMILARITY: Belongs to the WD repeat PAAF1/RPN14 family.
CC       {ECO:0000256|ARBA:ARBA00038321}.
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DR   EMBL; OX365902; CAI4062034.1; -; Genomic_DNA.
DR   EMBL; AACI03001958; EJT41727.1; -; Genomic_DNA.
DR   AlphaFoldDB; J6EDG8; -.
DR   STRING; 226230.J6EDG8; -.
DR   HOGENOM; CLU_037051_3_1_1; -.
DR   Proteomes; UP000002753; Unassembled WGS sequence.
DR   Proteomes; UP001162087; Chromosome 7.
DR   Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 2.
DR   InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR   InterPro; IPR036322; WD40_repeat_dom_sf.
DR   InterPro; IPR001680; WD40_rpt.
DR   PANTHER; PTHR19857:SF19; 26S PROTEASOME REGULATORY SUBUNIT RPN14; 1.
DR   PANTHER; PTHR19857; MITOCHONDRIAL DIVISION PROTEIN 1-RELATED; 1.
DR   Pfam; PF00400; WD40; 2.
DR   SMART; SM00320; WD40; 4.
DR   SUPFAM; SSF50978; WD40 repeat-like; 1.
DR   PROSITE; PS50082; WD_REPEATS_2; 2.
DR   PROSITE; PS50294; WD_REPEATS_REGION; 2.
PE   3: Inferred from homology;
KW   Proteasome {ECO:0000256|ARBA:ARBA00022942};
KW   Reference proteome {ECO:0000313|Proteomes:UP000002753};
KW   WD repeat {ECO:0000256|PROSITE-ProRule:PRU00221}.
FT   REPEAT          133..174
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT   REPEAT          175..216
FT                   /note="WD"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
SQ   SEQUENCE   418 AA;  46527 MW;  B3BAF72FF6EB7A96 CRC64;
     MGKNITVAHI QYDFEAVLEE EEPDNDREFY INIDRNLNEI KEHKMVVLAN GRGIDAGEGN
     KFKKLSSHLY RAQLDGQNFL FNTIKRDCSK TLKGADYTSV DTIKVHMRRF ILGTTKGDIK
     VLDSNFNLET EIHQAHAGEI STIKFFPSGE ALISGSQDMR LKIWSVKDGS NPRTLIGHRA
     KITDIAIIDR GRNVLSASLD GSIRLWECGT ATTIHTFNRK ENPSDGVNSI VTFMDTDKLS
     LEIPTFKSTN LEFGTCGKHV IAGHVSGVIT VHDVFSKEQT IQLPSKFTSA CNSLAIDVNE
     ANYVYAGYEN GMLAQWDLTS PECPVDEFFV NEGIPINSLY CVSDTLFVSS GPDTSLKLDI
     IRDPGTQRPK IASKTPTFFV SNDNEVSQFC LIGRNGSKKD VIEVGKYNFC VLYNLTEP
//
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