ID J6EDG8_SACK1 Unreviewed; 418 AA.
AC J6EDG8;
DT 31-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 31-OCT-2012, sequence version 1.
DT 24-JAN-2024, entry version 35.
DE SubName: Full=RPN14-like protein {ECO:0000313|EMBL:EJT41727.1};
GN Name=YGL004C {ECO:0000313|EMBL:EJT41727.1};
GN Synonyms=SKDI07G2510 {ECO:0000313|EMBL:CAI4062034.1};
GN ORFNames=SKDI_07G2510 {ECO:0000313|EMBL:CAI4062034.1}, SKUD_188104
GN {ECO:0000313|EMBL:EJT41727.1};
OS Saccharomyces kudriavzevii (strain ATCC MYA-4449 / AS 2.2408 / CBS 8840 /
OS NBRC 1802 / NCYC 2889) (Yeast).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes;
OC Saccharomycetales; Saccharomycetaceae; Saccharomyces.
OX NCBI_TaxID=226230 {ECO:0000313|EMBL:EJT41727.1, ECO:0000313|Proteomes:UP000002753};
RN [1] {ECO:0000313|EMBL:EJT41727.1, ECO:0000313|Proteomes:UP000002753}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC MYA-4449 / AS 2.2408 / CBS 8840 / NBRC 1802 / NCYC 2889
RC {ECO:0000313|Proteomes:UP000002753}, and IFO 1802
RC {ECO:0000313|EMBL:EJT41727.1};
RX PubMed=12775844; DOI=10.1126/science.1084337;
RA Cliften P.F., Sudarsanam P., Desikan A., Fulton L., Fulton B., Majors J.,
RA Waterston R., Cohen B.A., Johnston M.;
RT "Finding functional features in Saccharomyces genomes by phylogenetic
RT footprinting.";
RL Science 301:71-76(2003).
RN [2] {ECO:0000313|EMBL:EJT41727.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=IFO 1802 {ECO:0000313|EMBL:EJT41727.1};
RA Cliften P.F., Johnston M.;
RL Submitted (APR-2003) to the EMBL/GenBank/DDBJ databases.
RN [3] {ECO:0000313|Proteomes:UP000002753}
RP GENOME REANNOTATION.
RC STRAIN=ATCC MYA-4449 / AS 2.2408 / CBS 8840 / NBRC 1802 / NCYC 2889
RC {ECO:0000313|Proteomes:UP000002753};
RX PubMed=22384314; DOI=10.1534/g3.111.000273;
RA Scannell D.R., Zill O.A., Rokas A., Payen C., Dunham M.J., Eisen M.B.,
RA Rine J., Johnston M., Hittinger C.T.;
RT "The awesome power of yeast evolutionary genetics: New genome sequences and
RT strain resources for the Saccharomyces sensu stricto genus.";
RL G3 (Bethesda) 1:11-25(2011).
RN [4] {ECO:0000313|EMBL:EJT41727.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=IFO 1802 {ECO:0000313|EMBL:EJT41727.1};
RA Cliften P., Hittinger C.T., Wang B., Sudarsanam P., Desikan A., Fulton L.,
RA Fulton B., Majors J., Waterston R., Cohen B.A., Johnston M.;
RL Submitted (AUG-2012) to the EMBL/GenBank/DDBJ databases.
RN [5] {ECO:0000313|EMBL:CAI4062034.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=IFO1802 {ECO:0000313|EMBL:CAI4062034.1};
RA Byrne P K.;
RL Submitted (OCT-2022) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the WD repeat PAAF1/RPN14 family.
CC {ECO:0000256|ARBA:ARBA00038321}.
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DR EMBL; OX365902; CAI4062034.1; -; Genomic_DNA.
DR EMBL; AACI03001958; EJT41727.1; -; Genomic_DNA.
DR AlphaFoldDB; J6EDG8; -.
DR STRING; 226230.J6EDG8; -.
DR HOGENOM; CLU_037051_3_1_1; -.
DR Proteomes; UP000002753; Unassembled WGS sequence.
DR Proteomes; UP001162087; Chromosome 7.
DR Gene3D; 2.130.10.10; YVTN repeat-like/Quinoprotein amine dehydrogenase; 2.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR InterPro; IPR001680; WD40_rpt.
DR PANTHER; PTHR19857:SF19; 26S PROTEASOME REGULATORY SUBUNIT RPN14; 1.
DR PANTHER; PTHR19857; MITOCHONDRIAL DIVISION PROTEIN 1-RELATED; 1.
DR Pfam; PF00400; WD40; 2.
DR SMART; SM00320; WD40; 4.
DR SUPFAM; SSF50978; WD40 repeat-like; 1.
DR PROSITE; PS50082; WD_REPEATS_2; 2.
DR PROSITE; PS50294; WD_REPEATS_REGION; 2.
PE 3: Inferred from homology;
KW Proteasome {ECO:0000256|ARBA:ARBA00022942};
KW Reference proteome {ECO:0000313|Proteomes:UP000002753};
KW WD repeat {ECO:0000256|PROSITE-ProRule:PRU00221}.
FT REPEAT 133..174
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
FT REPEAT 175..216
FT /note="WD"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00221"
SQ SEQUENCE 418 AA; 46527 MW; B3BAF72FF6EB7A96 CRC64;
MGKNITVAHI QYDFEAVLEE EEPDNDREFY INIDRNLNEI KEHKMVVLAN GRGIDAGEGN
KFKKLSSHLY RAQLDGQNFL FNTIKRDCSK TLKGADYTSV DTIKVHMRRF ILGTTKGDIK
VLDSNFNLET EIHQAHAGEI STIKFFPSGE ALISGSQDMR LKIWSVKDGS NPRTLIGHRA
KITDIAIIDR GRNVLSASLD GSIRLWECGT ATTIHTFNRK ENPSDGVNSI VTFMDTDKLS
LEIPTFKSTN LEFGTCGKHV IAGHVSGVIT VHDVFSKEQT IQLPSKFTSA CNSLAIDVNE
ANYVYAGYEN GMLAQWDLTS PECPVDEFFV NEGIPINSLY CVSDTLFVSS GPDTSLKLDI
IRDPGTQRPK IASKTPTFFV SNDNEVSQFC LIGRNGSKKD VIEVGKYNFC VLYNLTEP
//