ID J7ER12_9BRAS Unreviewed; 598 AA.
AC J7ER12;
DT 31-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 31-OCT-2012, sequence version 1.
DT 27-MAR-2024, entry version 36.
DE SubName: Full=Phytochrome A {ECO:0000313|EMBL:AEN85308.1};
DE Flags: Fragment;
GN Name=phyA {ECO:0000313|EMBL:AEN85308.1};
OS Erucaria hispanica.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Erucaria.
OX NCBI_TaxID=308317 {ECO:0000313|EMBL:AEN85308.1};
RN [1] {ECO:0000313|EMBL:AEN85308.1}
RP NUCLEOTIDE SEQUENCE.
RX PubMed=22081414; DOI=10.3732/ajb.1100203;
RA Hall J.C., Tisdale T.E., Donohue K., Wheeler A., Al-Yahya M.A.,
RA Kramer E.M.;
RT "Convergent evolution of a complex fruit structure in the tribe Brassiceae
RT (Brassicaceae).";
RL Am. J. Bot. 98:1989-2003(2011).
CC -!- SIMILARITY: Belongs to the phytochrome family.
CC {ECO:0000256|ARBA:ARBA00008235}.
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DR EMBL; JN584847; AEN85308.1; -; Genomic_DNA.
DR AlphaFoldDB; J7ER12; -.
DR GO; GO:0009881; F:photoreceptor activity; IEA:UniProtKB-KW.
DR GO; GO:0009584; P:detection of visible light; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00130; PAS; 1.
DR Gene3D; 3.30.450.270; -; 1.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 3.30.450.20; PAS domain; 2.
DR InterPro; IPR003018; GAF.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR013767; PAS_fold.
DR InterPro; IPR016132; Phyto_chromo_attachment.
DR InterPro; IPR013516; Phyto_chromo_BS.
DR InterPro; IPR001294; Phytochrome.
DR InterPro; IPR013515; Phytochrome_cen-reg.
DR InterPro; IPR043150; Phytochrome_PHY_sf.
DR NCBIfam; TIGR00229; sensory_box; 1.
DR PANTHER; PTHR47876; OS08G0260000 PROTEIN; 1.
DR PANTHER; PTHR47876:SF3; PHYTOCHROME 1; 1.
DR Pfam; PF01590; GAF; 1.
DR Pfam; PF00989; PAS; 1.
DR Pfam; PF00360; PHY; 1.
DR PRINTS; PR01033; PHYTOCHROME.
DR SMART; SM00065; GAF; 1.
DR SMART; SM00091; PAS; 1.
DR SUPFAM; SSF55781; GAF domain-like; 2.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR PROSITE; PS50112; PAS; 1.
DR PROSITE; PS00245; PHYTOCHROME_1; 1.
DR PROSITE; PS50046; PHYTOCHROME_2; 1.
PE 3: Inferred from homology;
KW Chromophore {ECO:0000256|ARBA:ARBA00022991};
KW Photoreceptor protein {ECO:0000256|ARBA:ARBA00022543};
KW Receptor {ECO:0000256|ARBA:ARBA00023170};
KW Sensory transduction {ECO:0000256|ARBA:ARBA00022606};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 38..211
FT /note="Phytochrome chromophore attachment site"
FT /evidence="ECO:0000259|PROSITE:PS50046"
FT DOMAIN 437..507
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:AEN85308.1"
FT NON_TER 598
FT /evidence="ECO:0000313|EMBL:AEN85308.1"
SQ SEQUENCE 598 AA; 66732 MW; 43091F7E0BA63ECC CRC64;
DFEPVKPYEV PMTAAGALQS YKLAAKAITR LQSLPSGSME RLCDTMVQEV FELTGYDRVM
AYKFHDDDHG EVVSEVTKPG LEPYLGLHYP ATDIPQAARF LFMKNKVRMI VDCNAKHVGV
LQDEKLSFDL TLCGSTLRAP HSCHLQYMAN MDSIASLVMA VVVNEEDGEG DAPDSTTPQK
RKRLWGLVVC HNTSPRFVPF PLRYACEFLA QVFAIHVNKE VELENQIVEK NILRTQTLLC
DMLMRDAPLG IISQSPNIMD LVKCDGAALL YKDKVWKLGI TPSDFHLQEI ASWLCEYHTD
STGLSTDSLH DAGFPRALAL GDSVCGMAAV RISSRDMIFW FRSHTAGEVR WGGAKHDPDD
KDDARRMHPR SSFKAFLEVV KTRSLPWKDY EMDAIHSLQL ILRNAFKDGE SADMNTKIIH
SKLNDLKIDG IQELEAVTSE MVRLIETATV PILAVDSDGL INGWNTKIAE LTGLPVDEAI
GKHLLTLVED SSVEIVKRML ENALEGTEEQ NVQFEIKTHL SRADAGPISL VVNACASRDL
HENVVGVCFV AHDLTGQKTV MDKFTRIEGD YKAIVQNPNP LIPPIFGTDE FGWCSEWN
//
