ID J7EU02_CRAAB Unreviewed; 598 AA.
AC J7EU02;
DT 31-OCT-2012, integrated into UniProtKB/TrEMBL.
DT 31-OCT-2012, sequence version 1.
DT 27-MAR-2024, entry version 36.
DE SubName: Full=Phytochrome A {ECO:0000313|EMBL:AEN85254.1};
DE Flags: Fragment;
GN Name=phyA {ECO:0000313|EMBL:AEN85254.1};
OS Crambe hispanica subsp. abyssinica (Abyssinian kale) (Crambe abyssinica).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Crambe.
OX NCBI_TaxID=3721 {ECO:0000313|EMBL:AEN85254.1};
RN [1] {ECO:0000313|EMBL:AEN85254.1}
RP NUCLEOTIDE SEQUENCE.
RX PubMed=22081414; DOI=10.3732/ajb.1100203;
RA Hall J.C., Tisdale T.E., Donohue K., Wheeler A., Al-Yahya M.A.,
RA Kramer E.M.;
RT "Convergent evolution of a complex fruit structure in the tribe Brassiceae
RT (Brassicaceae).";
RL Am. J. Bot. 98:1989-2003(2011).
CC -!- SIMILARITY: Belongs to the phytochrome family.
CC {ECO:0000256|ARBA:ARBA00008235}.
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DR EMBL; JN584793; AEN85254.1; -; Genomic_DNA.
DR AlphaFoldDB; J7EU02; -.
DR GO; GO:0009881; F:photoreceptor activity; IEA:UniProtKB-KW.
DR GO; GO:0009584; P:detection of visible light; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00130; PAS; 1.
DR Gene3D; 3.30.450.270; -; 1.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 3.30.450.20; PAS domain; 2.
DR InterPro; IPR003018; GAF.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR000014; PAS.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR013767; PAS_fold.
DR InterPro; IPR016132; Phyto_chromo_attachment.
DR InterPro; IPR001294; Phytochrome.
DR InterPro; IPR013515; Phytochrome_cen-reg.
DR InterPro; IPR043150; Phytochrome_PHY_sf.
DR NCBIfam; TIGR00229; sensory_box; 1.
DR PANTHER; PTHR47876; OS08G0260000 PROTEIN; 1.
DR PANTHER; PTHR47876:SF3; PHYTOCHROME 1; 1.
DR Pfam; PF01590; GAF; 1.
DR Pfam; PF00989; PAS; 1.
DR Pfam; PF00360; PHY; 1.
DR PRINTS; PR01033; PHYTOCHROME.
DR SMART; SM00065; GAF; 1.
DR SMART; SM00091; PAS; 1.
DR SUPFAM; SSF55781; GAF domain-like; 2.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR PROSITE; PS50112; PAS; 1.
DR PROSITE; PS50046; PHYTOCHROME_2; 1.
PE 3: Inferred from homology;
KW Chromophore {ECO:0000256|ARBA:ARBA00022991};
KW Photoreceptor protein {ECO:0000256|ARBA:ARBA00022543};
KW Receptor {ECO:0000256|ARBA:ARBA00023170};
KW Sensory transduction {ECO:0000256|ARBA:ARBA00022606};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 38..211
FT /note="Phytochrome chromophore attachment site"
FT /evidence="ECO:0000259|PROSITE:PS50046"
FT DOMAIN 437..507
FT /note="PAS"
FT /evidence="ECO:0000259|PROSITE:PS50112"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:AEN85254.1"
FT NON_TER 598
FT /evidence="ECO:0000313|EMBL:AEN85254.1"
SQ SEQUENCE 598 AA; 66746 MW; 35546562D2D4AFBC CRC64;
DFEPVKPYEV PMTAAGALQS YKLAAKAITR LQSLPSGSME RLCDTMVQEV FELTGYDRVM
AYKFHDDDHG EVVSEVTKPG LEPYLGLHYP ATDIPQAARF LFMKNKVRMI VDCNAKHVRV
LQDEKLSVDL TLCGSTLRAP YSCHLQYMAN MDSIASLVMA VVVNEEDGEG DAPDSTAPQK
RKRLWGLVVC HNTTPRFVPF PLRYACEFLA QVFAIHVNKE VELENQIVEK NILRTQTLLC
DMLMRDAPLG IVSQSPNIMD LVKCDGAALL YKDKVWKLGI TPSEFHLLEI ASWLCEYHTD
STGLSTDSLH DAGFPRALAL GDSVCGMAAV RISSKDMIFW FRSHTAGEVR WGGAKHDPDD
RDDARRMHPR SSFKAFLEVV KTRSLPWKDY EMDAIHSLQL ILRNAFKDGE TGDVNTKIIH
SKLNDLKIDG IQELEAVTSE MVRLIETATV PILAVDSDGL VNGWNTKIAE LTGLPVDEAI
GKHLLTLVED SSVEIVKRML ENALEGTEEQ NVQFEIKTHL SRADAGPISL VVNACASRDL
HENVVGVCFV AHDLTGQKTV MDKFTRIEGD YKAIIQNPNP LIPPIFGTDE FGWCSEWN
//
