ID   J9G1D5_9SPIT            Unreviewed;       713 AA.
AC   J9G1D5;
DT   31-OCT-2012, integrated into UniProtKB/TrEMBL.
DT   31-OCT-2012, sequence version 1.
DT   24-JAN-2024, entry version 39.
DE   SubName: Full=Crooked neck protein, putative {ECO:0000313|EMBL:EJY84066.1};
GN   ORFNames=OXYTRI_18196 {ECO:0000313|EMBL:EJY84066.1};
OS   Oxytricha trifallax.
OC   Eukaryota; Sar; Alveolata; Ciliophora; Intramacronucleata; Spirotrichea;
OC   Stichotrichia; Sporadotrichida; Oxytrichidae; Oxytrichinae; Oxytricha.
OX   NCBI_TaxID=1172189 {ECO:0000313|EMBL:EJY84066.1};
RN   [1] {ECO:0000313|EMBL:EJY84066.1}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=JRB310 {ECO:0000313|EMBL:EJY84066.1};
RX   PubMed=23382650; DOI=10.1371/journal.pbio.1001473;
RA   Swart E.C., Bracht J.R., Magrini V., Minx P., Chen X., Zhou Y.,
RA   Khurana J.S., Goldman A.D., Nowacki M., Schotanus K., Jung S., Fulton R.S.,
RA   Ly A., McGrath S., Haub K., Wiggins J.L., Storton D., Matese J.C.,
RA   Parsons L., Chang W.J., Bowen M.S., Stover N.A., Jones T.A., Eddy S.R.,
RA   Herrick G.A., Doak T.G., Wilson R.K., Mardis E.R., Landweber L.F.;
RT   "The Oxytricha trifallax Macronuclear Genome: A Complex Eukaryotic Genome
RT   with 16,000 Tiny Chromosomes.";
RL   PLoS Biol. 11:E1001473-E1001473(2013).
CC   -!- SIMILARITY: Belongs to the crooked-neck family.
CC       {ECO:0000256|ARBA:ARBA00008644}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:EJY84066.1}.
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DR   EMBL; AMCR01004389; EJY84066.1; -; Genomic_DNA.
DR   AlphaFoldDB; J9G1D5; -.
DR   EnsemblProtists; EJY84066; EJY84066; OXYTRI_18196.
DR   OrthoDB; 5479069at2759; -.
DR   GO; GO:0005634; C:nucleus; IEA:InterPro.
DR   GO; GO:0000398; P:mRNA splicing, via spliceosome; IEA:InterPro.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 3.
DR   InterPro; IPR003107; HAT.
DR   InterPro; IPR008847; Suf.
DR   InterPro; IPR045075; Syf1-like.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   PANTHER; PTHR11246:SF3; CROOKED NECK-LIKE PROTEIN 1; 1.
DR   PANTHER; PTHR11246; PRE-MRNA SPLICING FACTOR; 1.
DR   Pfam; PF05843; Suf; 2.
DR   SMART; SM00386; HAT; 14.
DR   SUPFAM; SSF48452; TPR-like; 4.
PE   3: Inferred from homology;
FT   DOMAIN          101..228
FT                   /note="Suppressor of forked"
FT                   /evidence="ECO:0000259|Pfam:PF05843"
FT   DOMAIN          441..567
FT                   /note="Suppressor of forked"
FT                   /evidence="ECO:0000259|Pfam:PF05843"
SQ   SEQUENCE   713 AA;  86167 MW;  4878FE7236B52A73 CRC64;
     MNELQKQLAS QAEQQANSTS TALPNQHLGI MRVPQTKNYN AAEIQITAEQ LLRESQLYKT
     DESQTFQQVI RDSDELDEYK YRTRKEFEDS IRKQRHHMGT WIKYAEWEAS IAEFDRARSV
     FERTVDVDFE HVTLWLKYAE MEMKNKFINH ARNVWERACK HLPRVDQFWY KYSYMEEMVG
     EFDRARKIFE DWMTWEPQEN AWNAYLKFEE RQGQLDKCRT ILERYIDVNP TVSSYIKAAK
     FEEQHRSKDQ ARLFYERALA ELGPKAFDEN FFIQFTNFEI RFHEHERAKI LYKYALDNLP
     KERANRLYQQ FLEFEKQYGS REEMEDVILT KRRHFLEAEI AKQQQASAGN QVYDYDLWFD
     YTRLEEQSGS IERAREIYER ALQNVPPVLE KRYWKRYVYL WINYAVFEEL QALNIERAQA
     IYEKLLFEMI PHERFTFSKL WIMFAQFLLR QKNLDRCRKV LGQSMGKCPK QKIFKAYAQI
     EMQLGQLDRC RTIYNKQIEI FSQNSSVWID YADFESQLDE VDRAREIYEL AISNHNLDMP
     EKVWQSYLDF EISLGDFDKV RSLYQRLLSK SKHLKVWLSY SKFESENAQD PDKARKIFFQ
     AYNHFKTTEP DLKEERLMIL ENWLRFEEGP LGDMTQLEQV RAKIPKKVKK RRKVKVINQE
     TGEEVNDQEG GWEEYYDYLF PDDAMEQKKS LKILEMAHKW KKDTATTTAP LKK
//