GenomeNet

Database: UniProt
Entry: J9I4S2_9SPIT
LinkDB: J9I4S2_9SPIT
Original site: J9I4S2_9SPIT 
ID   J9I4S2_9SPIT            Unreviewed;      1396 AA.
AC   J9I4S2;
DT   31-OCT-2012, integrated into UniProtKB/TrEMBL.
DT   31-OCT-2012, sequence version 1.
DT   30-AUG-2017, entry version 21.
DE   SubName: Full=WD-40 repeat protein {ECO:0000313|EMBL:EJY65510.1};
GN   ORFNames=OXYTRI_14336 {ECO:0000313|EMBL:EJY65510.1};
OS   Oxytricha trifallax.
OC   Eukaryota; Alveolata; Ciliophora; Intramacronucleata; Spirotrichea;
OC   Stichotrichia; Sporadotrichida; Oxytrichidae; Oxytrichinae; Oxytricha.
OX   NCBI_TaxID=1172189 {ECO:0000313|EMBL:EJY65510.1, ECO:0000313|Proteomes:UP000006077};
RN   [1] {ECO:0000313|EMBL:EJY65510.1, ECO:0000313|Proteomes:UP000006077}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=SB310 {ECO:0000313|Proteomes:UP000006077};
RX   PubMed=23382650; DOI=10.1371/journal.pbio.1001473;
RA   Swart E.C., Bracht J.R., Magrini V., Minx P., Chen X., Zhou Y.,
RA   Khurana J.S., Goldman A.D., Nowacki M., Schotanus K., Jung S.,
RA   Fulton R.S., Ly A., McGrath S., Haub K., Wiggins J.L., Storton D.,
RA   Matese J.C., Parsons L., Chang W.J., Bowen M.S., Stover N.A.,
RA   Jones T.A., Eddy S.R., Herrick G.A., Doak T.G., Wilson R.K.,
RA   Mardis E.R., Landweber L.F.;
RT   "The Oxytricha trifallax Macronuclear Genome: A Complex Eukaryotic
RT   Genome with 16,000 Tiny Chromosomes.";
RL   PLoS Biol. 11:E1001473-E1001473(2013).
CC   -!- CAUTION: The sequence shown here is derived from an
CC       EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is
CC       preliminary data. {ECO:0000313|EMBL:EJY65510.1}.
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution-NoDerivs License
CC   -----------------------------------------------------------------------
DR   EMBL; AMCR01021387; EJY65510.1; -; Genomic_DNA.
DR   ProteinModelPortal; J9I4S2; -.
DR   EnsemblProtists; EJY65510; EJY65510; OXYTRI_14336.
DR   Proteomes; UP000006077; Unassembled WGS sequence.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0005216; F:ion channel activity; IEA:InterPro.
DR   Gene3D; 2.130.10.10; -; 2.
DR   InterPro; IPR005821; Ion_trans_dom.
DR   InterPro; IPR024862; TRPV.
DR   InterPro; IPR015943; WD40/YVTN_repeat-like_dom.
DR   PANTHER; PTHR10582; PTHR10582; 1.
DR   Pfam; PF00520; Ion_trans; 1.
PE   4: Predicted;
KW   Complete proteome {ECO:0000313|Proteomes:UP000006077};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000006077};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM   1097   1117       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM   1129   1146       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM   1197   1216       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM   1236   1255       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM   1300   1323       Helical. {ECO:0000256|SAM:Phobius}.
FT   DOMAIN     1099   1334       Ion_trans. {ECO:0000259|Pfam:PF00520}.
SQ   SEQUENCE   1396 AA;  166691 MW;  B63D9CF5BDA7B2AB CRC64;
     MEIICCKFGE TESKFTNQPF SVFKLWILIN YNIDEITSWS IDHHFPIYIS AIKFHHDEKG
     SDKILIIHIY KNDKVEFLRV RDFANDSSYN ILSVCKNYCL IASESQIRVG ELIMQFEDFS
     DILSIDIQQR SGKQQSYHHT SNYQDTDNAK GKDTARNNQI LGFSRIISIF YDQTDHFNLI
     IECTDNSILI EKLIINNGCL SLKNSHSNRL FDISNDSIVD IQFDYEFNTI LALKKSGAIE
     IYKNGVVIYS KRDIKYDDIW VFNKTMYFFS SQNKQVDFVS YVSQEQISDS QCETLSIKDW
     QSIKQLNIVD IHFTFIFDLI YVVKLNYLRI YDINTHKCVF EYFFDCEMKK VVQLNGYVYF
     IKNRHIDIMQ VMLPNFSIQE MPLIQGEFKQ LSSNNSVIYL ITKDGSNQKL FRIKDTLARQ
     YREYFDNDDV LVNFNLRRST SEKLLLFNER QSVLKTLYFQ KDEIRKYIQN QIDRKAANFK
     SDEWFAFENK DKTKLYFQKY DNLIGQMRTF DIEKSTNIVK VVASVPWLNQ PVVSGDLIYE
     VNYIVNQVFS NKIVSSGNRV AVLEKLHKIR IYNQPNQNSY LPKIFESQKY KCLCWKRLDN
     QIIILDCNQQ LITLNIVTGK FIQGYRISKK LLSASAQYID QIRDEYETSR VVMLDDTFKG
     EKLKLEKKSG LKLYKLIEIV SNCRIKVVMY FLLPEYKQPF KFSEDLKFMI NCQTYEIYQR
     QDYEYEDEIY MWQQLTFNTI ESNNWKYNLN NSIVSPNLQR YIDYEIKNKK YQIKNTLDGK
     VWKEIPTELT DQSKLNQFIY FRWIGNNEVA MLHDQGVEKI FDIENDFEEN NFRIINVQSN
     YGSNKNIDKG FHINLKLYHL DEVEKKLLTN QNQFLIFQQT QPSKKEIQRL FQVAMIEFQY
     SWCDHYMKYL PMLEFSFTHY HWVLAEKIIS DNTQKILKIH DEFQFLFIKN PEGMTPLHLC
     LKQRNFFAID IFLKMLTGHN FYSHSFNIID ILPNIIKTEL PSLKNYLDSR VIQTQIMAQY
     KRGAIRTKKD KNYNIQLSNL WPNRQEFIDN FFELDQLETD VKVMVLDLPR NLEIFEIKTV
     QYLIDFQWTQ TKHYTIIFLY MPYLMNHLIF FIYSNFVSKY DEHNEQFQTK IGFFVTILLL
     QIYLIITEIR QFQFTKMNYL RSAKNYMDLL QIGFTTCTMI SHYIYDTRDE YSQSKILPTI
     HALASLILWI NFLYFLRLFD STSYLIRIVI NVFWDMKWFL ILLLVCQIGF AESFLRLCEY
     SDMENQFVEN ILDAFVFTFR MSLVDNDTSQ FNESMSRSTI WILFVIASVV MQIVMLNLLI
     SIISKSFEDI NKQSKLAAYQ EKSRIIYENA FIIPASINKK EDSDKFITII KKFSANQNEN
     NMRWQIAKIR QKCKIR
//
DBGET integrated database retrieval system