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Database: UniProt
Entry: J9IH16_9SPIT
LinkDB: J9IH16_9SPIT
Original site: J9IH16_9SPIT 
ID   J9IH16_9SPIT            Unreviewed;      1231 AA.
AC   J9IH16;
DT   31-OCT-2012, integrated into UniProtKB/TrEMBL.
DT   31-OCT-2012, sequence version 1.
DT   25-OCT-2017, entry version 15.
DE   SubName: Full=WD-40 repeat protein {ECO:0000313|EMBL:EJY70760.1};
GN   ORFNames=OXYTRI_08378 {ECO:0000313|EMBL:EJY70760.1};
OS   Oxytricha trifallax.
OC   Eukaryota; Alveolata; Ciliophora; Intramacronucleata; Spirotrichea;
OC   Stichotrichia; Sporadotrichida; Oxytrichidae; Oxytrichinae; Oxytricha.
OX   NCBI_TaxID=1172189 {ECO:0000313|EMBL:EJY70760.1, ECO:0000313|Proteomes:UP000006077};
RN   [1] {ECO:0000313|EMBL:EJY70760.1, ECO:0000313|Proteomes:UP000006077}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=SB310 {ECO:0000313|Proteomes:UP000006077};
RX   PubMed=23382650; DOI=10.1371/journal.pbio.1001473;
RA   Swart E.C., Bracht J.R., Magrini V., Minx P., Chen X., Zhou Y.,
RA   Khurana J.S., Goldman A.D., Nowacki M., Schotanus K., Jung S.,
RA   Fulton R.S., Ly A., McGrath S., Haub K., Wiggins J.L., Storton D.,
RA   Matese J.C., Parsons L., Chang W.J., Bowen M.S., Stover N.A.,
RA   Jones T.A., Eddy S.R., Herrick G.A., Doak T.G., Wilson R.K.,
RA   Mardis E.R., Landweber L.F.;
RT   "The Oxytricha trifallax Macronuclear Genome: A Complex Eukaryotic
RT   Genome with 16,000 Tiny Chromosomes.";
RL   PLoS Biol. 11:E1001473-E1001473(2013).
CC   -!- CAUTION: The sequence shown here is derived from an
CC       EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is
CC       preliminary data. {ECO:0000313|EMBL:EJY70760.1}.
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DR   EMBL; AMCR01016674; EJY70760.1; -; Genomic_DNA.
DR   EnsemblProtists; EJY70760; EJY70760; OXYTRI_08378.
DR   Proteomes; UP000006077; Unassembled WGS sequence.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0005216; F:ion channel activity; IEA:InterPro.
DR   InterPro; IPR005821; Ion_trans_dom.
DR   InterPro; IPR024862; TRPV.
DR   PANTHER; PTHR10582; PTHR10582; 2.
DR   Pfam; PF00520; Ion_trans; 1.
PE   4: Predicted;
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Complete proteome {ECO:0000313|Proteomes:UP000006077};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000006077};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    797    818       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    830    850       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    870    888       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    895    915       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    935    955       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM   1000   1022       Helical. {ECO:0000256|SAM:Phobius}.
FT   DOMAIN      799   1031       Ion_trans. {ECO:0000259|Pfam:PF00520}.
FT   COILED     1154   1203       {ECO:0000256|SAM:Coils}.
SQ   SEQUENCE   1231 AA;  144728 MW;  A9BB27C4D0F4337F CRC64;
     MQWKLSLPIG DANSKLDNDI KNGKVDSTKQ NKFLYKYECF DSQEIRGFYS VHKIAQFSLF
     ENLLIFTTVE NTLCAINMSY EKFKTNFIET AQFFKGDFKL DITSNVCVQI EESDSKLSFF
     QIINREYKQD KKEMIELNLI GIIDSNLKII KYIQLVNDQM IFVFGVQNEK DEFLEILMID
     AYTGRLINSY KIENLTTLQG FQYSKITQQF YLYNIYLNEQ QDDYVQEFFN LDFLYSSFNT
     VDKISLPREY KIQTFMSSKN SILLYKYDKK AECYVIRTCD TSVTPYAISK PIFLDNPKLV
     FIIHNPAIFL INNNKQILYH SKSSYRQSFT IGTINFEKGT VEDTTFIEEY SQNIRKVFEF
     QQNENLGIIL EIDDHVVKFH YSISKKMAAS GMLVLLKTHF INAENQLVLL NQGYQTDIYN
     LSYKQNKWFY SQKVSIDNSR GLKIDFDKAD ENITFIKDYN NSTAFILENS FEFEEKIFKH
     YSVFRVSTLV GSQTNGSPYK FDFFHYQDLK RQTIPWQTLE IEQLNQKFTL YDDMENQIIG
     FIQQSYNTQD IQKFLNYRNS SLTDVDIMNN IKKEGNLKKL LMYYPQIGNI LNLVISRPRV
     IEYLIKQFQL LNSSELPILI FLNDQQSPLD VAIKANQIKS VSLYLDLIVK FQNNHSFNYL
     IDKNLISLIQ KSISLSEYFE SNLPIIKVNN KNYPDLHFDD QEIIVGIDCI DQPRDLLDKY
     NEILGQELQQ NQDGDQQQFP IEYHLINFPE TLTKEPTKLM KVLSETDNME LFDALAIQTI
     INFKWKQYTK SFFQTQFNIF LIFCFTFLFE IMYSFTNVDR KSDPPVDQRN IYVFCLLKSL
     ATIVLTYFLI YETKQALKQE NYFKEIWNFF DYMLILTYIG YIILEIFTPF NDSVIIIKLI
     IVFLSFLKVN FFLRIYDGFS FLVSMMAAVF VDLKYFIGFF LIFILEFGIV FAILFDATAI
     EEYQGIGISA YMMMAFRTSS GDFNVDSYKD QSSTLVVISW LAWIVAVMLL NVMFMNFIIA
     VISESYEKVM QKLVAESYRV KVQMIVEREL QFSDEELKST KLFPKYMLLR RPVSSDSNEQ
     GEWQGFVKDI KQSIRTVAAK QKTEIIANFK SQNNNTKSFD LGIKSLEKRF GQIDSNLKSN
     DENIKVQDQS IKQLVTSQNE LAKSQNELVN SQNEKFNQLE QSITKLNNKI SSQDNEIQSS
     QKMIFQFIEE YRLENQKTQA LLIQSLQKPQ Q
//
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